Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT5G62500 end binding protein 1B encodes a homolog of animal microtubule-end-binding protein. There are two other members of this family. EB1 forms foci at regions where the minus ends of microtubules are gathered during mitosis and early cytokinesis. end binding protein 1B (EB1B)%3B FUNCTIONS IN: microtubule binding%3B INVOLVED IN: thigmotropism%2C cytoskeleton organization%2C positive gravitropism%3B LOCATED IN: in 6 components%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146)%2C Calponin-like actin-binding (InterPro:IPR001715)%2C EB1%2C C-terminal (InterPro:IPR004953)%3B BEST Arabidopsis thaliana protein match is: microtubule end binding protein EB1A (TAIR:AT3G47690.1)%3B Has 1005 Blast hits to 968 proteins in 223 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 581%3B Fungi - 144%3B Plants - 110%3B Viruses - 3%3B Other Eukaryotes - 167 (source: NCBI BLink). Chr5 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G1130 LG-11 - View
Actinidia chinensis Actinidia04906 Lachesis_group1 + View
Arabidopsis lyrata AL5G26970 scaffold_5 + View
Arabidopsis lyrata AL8G39390 scaffold_8 + View
Avicennia marina MSTRG.23031 ScioBoG_3703_HRSCAF_3719 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.HXE52Q K10436 - microtubule-associated protein, RP/EB family (MAPRE) arahy.Tifrunner.gnm1.Arahy.01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.8SID5H K10436 - microtubule-associated protein, RP/EB family (MAPRE) arahy.Tifrunner.gnm1.Arahy.11 + View
Brassica carinata BcaB07g29842 ChrB07 + View
Brassica carinata BcaC01g01783 ChrC01 - View
Brassica carinata BcaB02g09653 ChrB02 + View
Brassica carinata BcaB01g00887 ChrB01 - View
Brassica carinata BcaC03g18155 ChrC03 + View
Brassica carinata BcaC01g02481 ChrC01 + View
Brassica napus C03p71910 C03 + View
Brassica napus A02p42360 A02 + View
Brassica napus A06p19920 A06 - View
Brassica napus C02p62240 C02 + View
Brassica napus C03p64340 C03 - View
Brassica oleracea BolC2t12281H C2 + View
Brassica oleracea BolC3t19488H C3 + View
Brassica rapa BraA06t25075Z A06 - View
Brassica rapa BraA06t25872Z A06 + View
Brassica rapa BraA02t09166Z A02 + View
Beta vulgaris EL10Ac5g10979 K10436 - microtubule-associated protein, RP/EB family (MAPRE) Chr5_EL10_PGA_scaffold2 + View
Camellia sinensis var. sinensis CSS0020479 PREDICTED: microtubule-associated protein RP/EB family member 1A [Prunus mume] Chr2 - View
Citrus clementina Ciclev10021657m.g scaffold_3 - View
Ceratophyllum demersum CDE02G2416 1 + View
Carpinus fangiana Cfa018962 Cfa08 - View
Cardamine hirsuta CARHR156360 Microtubule-associated protein RP/EB family member Chr5 + View
Cardamine hirsuta CARHR276290 Microtubule-associated protein RP/EB family member Chr8 + View
Carya illinoinensis CiPaw.12G014300 K10436 - microtubule-associated protein, RP/EB family (MAPRE) Chr12 - View
Cucumis melo MELO3C001970.2 RP/EB family microtubule-associated protein chr12 - View
Chenopodium quinoa AUR62021713 EB1B: Microtubule-associated protein RP/EB family member 1B C_Quinoa_Scaffold_1675 - View
Capsella rubella Carub.0005s1382 K10436 - microtubule-associated protein, RP/EB family (MAPRE) scaffold_5 + View
Capsella rubella Carub.0008s2316 K10436 - microtubule-associated protein, RP/EB family (MAPRE) scaffold_8 + View
Cucumis sativus L. CsaV3_1G005310 Microtubule-associated protein RP/EB chr1 + View
Davidia involucrata Dinv38690 GWHABJS00000019 - View
Durio zibethinus Duzib205G1814 NW_019168381.1 + View
Erigeron canadensis ECA232G4834 Conyza_canadensis_scaffold:2 - View
Erigeron canadensis ECA246G1634 Conyza_canadensis_scaffold:8 - View
Eutrema salsugineum Thhalv10010609m.g K10436 - microtubule-associated protein, RP/EB family (MAPRE) scaffold_16 + View
Eutrema salsugineum Thhalv10004754m.g K10436 - microtubule-associated protein, RP/EB family (MAPRE) scaffold_6 - View
Fragaria x ananassa FAN18G0514 K10436 - microtubule-associated protein, RP/EB family (MAPRE) Fvb5-1 - View
Fragaria x ananassa FAN08G1043 K10436 - microtubule-associated protein, RP/EB family (MAPRE) Fvb5-3 + View
Fragaria x ananassa FAN13G2267 KOG3000 - Microtubule-binding protein involved in cell cycle control Fvb5-2 - View
Fragaria x ananassa FAN04G0316 K10436 - microtubule-associated protein, RP/EB family (MAPRE) Fvb5-4 - View
Fragaria vesca FvH4_5g15190 K10436 - microtubule-associated protein, RP/EB family (MAPRE) Fvb5 - View
Gossypium hirsutum Gohir.A03G065600 K10436 - microtubule-associated protein, RP/EB family (MAPRE) A03 + View
Glycine max Glyma.04G171300 K10436 - microtubule-associated protein, RP/EB family (MAPRE) Gm04 - View
Glycine max Glyma.06G192600 K10436 - microtubule-associated protein, RP/EB family (MAPRE) Gm06 + View
Glycine max Glyma.17G098700 K10436 - microtubule-associated protein, RP/EB family (MAPRE) Gm17 + View
Gossypium raimondii Gorai.003G095700 Chr03 + View
Lotus japonicus Lj1g0024887 K10436 - microtubule-associated protein, RP/EB family (MAPRE) chr1 + View
Lonicera japonica Lj9A462T70 GWHAAZE00000009 + View
Lactuca sativa Lsat_1_v5_gn_5_19360 K10436 - microtubule-associated protein, RP/EB family (MAPRE) Lsat_1_v8_lg_5 + View
Magnolia biondii MBI05_g35467_MAGBIO AED:0.20 Chr05 - View
Malus domestica MD14G1197800 microtubule end binding protein EB1A Chr14 + View
Malus domestica MD06G1191400 end binding protein 1B Chr06 + View
Manihot esculenta Manes.06G094300 Chromosome06 - View
Medicago truncatula Medtr4g108330 RP/EB family microtubule-associated protein chr4 + View
Nelumbo nucifera Nn4g23112 chr4 + View
Olea europaea Oeu006499.1 chr10 - View
Punica granatum PGR083G1666 NC_045133.1 + View
Prunus persica Prupe.5G189900 K10436 - microtubule-associated protein, RP/EB family (MAPRE) Pp05 + View
Pisum sativum Psat4g052120 EB1-like C-terminal motif chr4LG4 + View
Populus trichocarpa Potri.015G062900 K10436 - microtubule-associated protein, RP/EB family (MAPRE) Chr15 - View
Phaseolus vulgaris Phvul.009G188500 K10436 - microtubule-associated protein, RP/EB family (MAPRE) Chr09 - View
Rhododendron simsii Rhsim08G0157200 chr08 - View
Striga asiatica SGA_v2.0_scaffold56G20026 scaffold56 - View
Salvia bowleyana SalBow7G3380 GWHASIU00000005 - View
Salix brachista Sabra15G0088200 GWHAAZH00000015 - View
Sechium edule Sed0025877 LG08 + View
Solanum lycopersicum Solyc03g116370.3 Microtubule-associated protein RP/EB family member 1C (AHRD V3.3 *** A0A2G3B798_CAPCH) SL4.0ch03 - View
Schrenkiella parvula Sp5g14240 K10436 - microtubule-associated protein, RP/EB family (MAPRE) ch5-1 - View
Schrenkiella parvula Sp2g25680 K10436 - microtubule-associated protein, RP/EB family (MAPRE) ch2-4 + View
Solanum pennellii Sopen03g035300 encodes a homolog of animal microtubule-end-binding protein. There are two other members of this family. EB1 forms foci at regions where the minus ends of microtubules are gathered during mitosis and early cytokinesis. | end binding protein 1B (EB1B) | FUNCTIONS IN: microtubule binding | INVOLVED IN: thigmotropism, cytoskeleton organization, positive gravitropism | LOCATED IN: in 6 components | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Calponin-homology , Calponin-like actin-binding , EB1, C-terminal | BEST Arabidopsis thaliana protein match is: microtubule end binding protein EB1A Spenn-ch03 - View
Solanum tuberosum PGSC0003DMG400000627 AtEB1b ST4.03ch03 - View
Trochodendron aralioides TAR622G0789 group8 - View
Theobroma cacao Thecc.03G083900 Microtubule end binding protein EB1A Chromosome_3 + View
Tarenaya hassleriana THA.LOC104821427 microtubule-associated protein RP/EB family member 1B isoform X1 NW_010966459.1 + View
Tarenaya hassleriana THA.LOC104819439 microtubule-associated protein RP/EB family member 1B-like NW_010966177.1 - View
Tripterygium wilfordii TWI60G1395 NC_052246.1 - View
Vaccinium macrocarpon vmacro17557 Similar to EB1B: Microtubule-associated protein RP/EB family member 1B (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1309G2018 CM024072.1 + View