Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT5G48160 potyvirus VPg interacting protein (DUF1423) Encodes a nuclear PHD finger protein that is functionally redundant with OBE1 and plays an important role in the maintenance and/or establishment of the root and shoot apical meristems. OBERON2 (OBE2)%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: in 6 processes%3B LOCATED IN: nucleus%3B EXPRESSED IN: 6 plant structures%3B EXPRESSED DURING: seedling growth%2C C globular stage%2C B proembryo stage%2C D bilateral stage%2C E expanded cotyledon stage%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1423%2C plant (InterPro:IPR004082)%2C Zinc finger%2C PHD-type (InterPro:IPR001965)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1423) (TAIR:AT3G07780.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G18340 LG-5 + View
Acer truncatum Atru.chr6.3358 chr6 - View
Actinidia chinensis Actinidia07887 Lachesis_group19 + View
Actinidia chinensis Actinidia09780 Lachesis_group5 + View
Arabidopsis lyrata AL3G19140 scaffold_3 + View
Arabidopsis lyrata AL8G20820 scaffold_8 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.LFBK1H PTHR11528//PTHR11528:SF41//PTHR21736//PTHR21736:SF20 - HEAT SHOCK PROTEIN 90 // HEAT SHOCK PROTEIN 89.1 // VERNALIZATION-INSENSITIVE PROTEIN 3 // PROTEIN OBERON 1-RELATED arahy.Tifrunner.gnm1.Arahy.07 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.LY71N7 PTHR11528//PTHR11528:SF41//PTHR21736//PTHR21736:SF20 - HEAT SHOCK PROTEIN 90 // HEAT SHOCK PROTEIN 89.1 // VERNALIZATION-INSENSITIVE PROTEIN 3 // PROTEIN OBERON 1-RELATED arahy.Tifrunner.gnm1.Arahy.17 - View
Brassica carinata BcaB07g30004 ChrB07 - View
Brassica carinata BcaC05g29570 ChrC05 + View
Brassica carinata BcaB03g14681 ChrB03 - View
Brassica carinata BcaB04g21269 ChrB04 - View
Brassica carinata BcaC09g47945 ChrC09 + View
Brassica napus C05p59540 C05 - View
Brassica napus A05p40440 A05 - View
Brassica oleracea BolC1t05533H C1 - View
Brassica oleracea BolC5t34609H C5 - View
Brassica rapa BraA01t04363Z A01 - View
Brassica rapa BraA05t22777Z A05 - View
Camellia sinensis var. sinensis CSS0045294 hypothetical protein JCGZ_18476 [Jatropha curcas] Chr7 - View
Cannabis sativa CANSAT64G1315 NC_044379.1 - View
Cicer arietinum L. Ca_06457_v3 Ca_LG2_v3 + View
Corylus avellana Haze_12688 Similar to HSP90-6: Heat shock protein 90-6, mitochondrial (Arabidopsis thaliana OX%3D3702) 5 + View
Citrus clementina Ciclev10014794m.g scaffold_2 - View
Carpinus fangiana Cfa014241 Cfa06 + View
Cardamine hirsuta CARHR184180 Potyviral VPg interacting protein 1 Chr6 + View
Cardamine hirsuta CARHR082480 Chaperone protein htpG family protein Chr3 + View
Carya illinoinensis CiPaw.04G196200 PTHR21736:SF20 - PROTEIN OBERON 1-RELATED Chr04 - View
Carya illinoinensis CiPaw.03G278700 PTHR21736:SF20 - PROTEIN OBERON 1-RELATED Chr03 - View
Citrullus lanatus ClCG02G009360 Chaperone protein htpG family protein LENGTH=780 CG_Chr02 + View
Citrullus lanatus ClCG02G002720 Potyviral VPg interacting protein 1 CG_Chr02 - View
Cucumis melo MELO3C024207.2 OBERON-like protein chr01 - View
Carica papaya Cpa.g.sc136.23 supercontig_136 - View
Capsella rubella Carub.0003s0735 K09487 - heat shock protein 90kDa beta (HSP90B, TRA1) scaffold_3 + View
Cucumis sativus L. CsaV3_7G002650 OBERON-like protein chr7 + View
Davidia involucrata Dinv21273 GWHABJS00000001 + View
Davidia involucrata Dinv04411 GWHABJS00000002 + View
Durio zibethinus Duzib211G0478 NW_019168049.1 + View
Durio zibethinus Duzib133G0393 NW_019167938.1 + View
Erigeron canadensis ECA240G0329 Conyza_canadensis_scaffold:5 + View
Erythranthe guttata Migut.H01289 scaffold_8 + View
Erythranthe guttata Migut.M01425 scaffold_13 + View
Eutrema salsugineum Thhalv10003897m.g PTHR21736:SF20 - PROTEIN OBERON 1-RELATED scaffold_6 + View
Eutrema salsugineum Thhalv10020400m.g PTHR21736:SF20 - PROTEIN OBERON 1-RELATED scaffold_13 - View
Fragaria x ananassa FAN09G0595 PTHR21736//PTHR21736:SF20 - VERNALIZATION-INSENSITIVE PROTEIN 3 // PROTEIN OBERON 1-RELATED Fvb6-2 - View
Fragaria x ananassa FAN14G3541 PTHR21736//PTHR21736:SF20 - VERNALIZATION-INSENSITIVE PROTEIN 3 // PROTEIN OBERON 1-RELATED Fvb6-1 - View
Fragaria x ananassa FAN02G2402 K09487 - heat shock protein 90kDa beta (HSP90B, TRA1) Fvb6-4 + View
Gossypium hirsutum Gohir.A07G190500 PTHR21736:SF20 - PROTEIN OBERON 1-RELATED A07 - View
Gossypium hirsutum Gohir.D07G196800 PTHR21736:SF20 - PROTEIN OBERON 1-RELATED D07 - View
Hydrangea macrophylla Hma1.2p1_0657F.1_g196950 Hma1.2p1_0657F.1 - View
Lupinus albus Lalb_Chr04g0247271 PTHR21736//PTHR21736:SF20 - VERNALIZATION-INSENSITIVE PROTEIN 3 // PROTEIN OBERON 1-RELATED Lalb_Chr04 - View
Lotus japonicus Lj6g0017172 PTHR21736//PTHR21736:SF20 - VERNALIZATION-INSENSITIVE PROTEIN 3 // PROTEIN OBERON 1-RELATED chr6 + View
Lonicera japonica Lj1A793G47 GWHAAZE00000001 + View
Lonicera japonica Lj8A134G78 GWHAAZE00000008 + View
Lactuca sativa Lsat_1_v5_gn_9_104581 K09487 - heat shock protein 90kDa beta (HSP90B, TRA1) Lsat_1_v8_lg_9 - View
Malus domestica MD02G1308100 Protein of unknown function (DUF1423) Chr02 + View
Malus domestica MD09G1122100 Protein of unknown function (DUF1423) Chr09 - View
Medicago truncatula Medtr5g097320 heat shock protein 81-2 chr5 + View
Prunus persica Prupe.3G201400 K09487 - heat shock protein 90kDa beta (HSP90B, TRA1) Pp03 + View
Populus trichocarpa Potri.002G221500 PTHR21736:SF20 - PROTEIN OBERON 1-RELATED Chr02 + View
Populus trichocarpa Potri.014G164800 PTHR21736:SF20 - PROTEIN OBERON 1-RELATED Chr14 - View
Phaseolus vulgaris Phvul.008G285400 K09487 - heat shock protein 90kDa beta (HSP90B, TRA1) Chr08 + View
Quercus lobata QL08p028619 8 + View
Rhododendron simsii Rhsim06G0174600 chr06 + View
Salix brachista Sabra14G0125500 GWHAAZH00000014 - View
Salix brachista Sabra02G0169300 GWHAAZH00000002 + View
Sechium edule Sed0000297 LG01 - View
Sechium edule Sed0005998 LG04 - View
Sechium edule Sed0001256 LG05 - View
Sapria himalayana SHI10138 scaffold10_15062905 - View
Schrenkiella parvula Sp2g18560 PTHR21736//PTHR21736:SF20 - VERNALIZATION-INSENSITIVE PROTEIN 3 // PROTEIN OBERON 1-RELATED ch2-4 - View
Schrenkiella parvula Sp3g06700 K09487 - heat shock protein 90kDa beta (HSP90B, TRA1) ch3-1 + View
Trochodendron aralioides TAR626G0385 group3 - View
Trochodendron aralioides TAR624G0599 group9 + View
Theobroma cacao Thecc.01G190800 Oberon 2 Chromosome_1 - View
Tarenaya hassleriana THA.LOC104819040 heat shock protein 90-6%2C mitochondrial-like isoform X1 NW_010966177.1 + View
Tarenaya hassleriana THA.LOC104802625 heat shock protein 90-6%2C mitochondrial NW_010970490.1 - View
Tarenaya hassleriana THA.LOC104826656 protein OBERON 2-like NW_010967707.1 + View
Tripterygium wilfordii TWI36G1024 NC_052237.1 - View
Tripterygium wilfordii TWI18G0788 NC_052241.1 + View
Tripterygium wilfordii TWI75G1713 NC_052253.1 + View
Vaccinium macrocarpon vmacro15741 Similar to PVIP: OBERON-like protein (Nicotiana benthamiana OX%3D4100) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro12100 Similar to HSP90-6: Heat shock protein 90-6, mitochondrial (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01030056001 chr12 + View