Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G28110 serine carboxypeptidase-like 45 serine carboxypeptidase-like 45 (SCPL45)%3B FUNCTIONS IN: serine-type carboxypeptidase activity%3B INVOLVED IN: proteolysis%3B LOCATED IN: plant-type cell wall%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Peptidase S10%2C serine carboxypeptidase (InterPro:IPR001563)%2C Peptidase S10%2C serine carboxypeptidase%2C active site (InterPro:IPR018202)%3B BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 46 (TAIR:AT2G33530.1)%3B Has 3718 Blast hits to 3657 proteins in 439 species: Archae - 0%3B Bacteria - 354%3B Metazoa - 639%3B Fungi - 854%3B Plants - 1450%3B Viruses - 0%3B Other Eukaryotes - 421 (source: NCBI BLink). serine carboxypeptidase-like 45 (SCPL45)%3B FUNCTIONS IN: serine-type carboxypeptidase activity%3B INVOLVED IN: proteolysis%3B LOCATED IN: plant-type cell wall%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Peptidase S10%2C serine carboxypeptidase (InterPro:IPR001563)%2C Peptidase S10%2C serine carboxypeptidase%2C active site (InterPro:IPR018202)%3B BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 46 (TAIR:AT2G33530.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr1 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG9G13450 LG-9 - View
Actinidia chinensis Actinidia30594 Lachesis_group10 - View
Arabidopsis lyrata AL4G29200 scaffold_4 - View
Arabidopsis lyrata AL1G41630 scaffold_1 - View
Amborella trichopoda ATR0582G002 AmTr_v1.0_scaffold00016 + View
Brassica carinata BcaB02g10570 ChrB02 - View
Brassica carinata BcaC02g11438 ChrC02 - View
Brassica carinata BcaC01g00007 ChrC01 - View
Brassica carinata BcaC05g26815 ChrC05 - View
Brassica napus C04p15590 C04 + View
Brassica napus A05p12010 A05 + View
Brassica napus A09p37950 A09 + View
Brassica napus C05p26810 C05 - View
Brassica napus C03p74750 C03 - View
Brassica oleracea BolC3t19724H C3 - View
Brassica oleracea BolC4t23127H C4 + View
Brassica oleracea BolC5t31402H C5 - View
Brassica rapa BraA05t20143Z A05 + View
Brassica rapa BraA09t39307Z A09 + View
Camellia sinensis var. sinensis CSS0019091 PREDICTED: serine carboxypeptidase-like 45 [Vitis vinifera] Chr10 + View
Cardamine hirsuta CARHR027580 serine carboxypeptidase-like 45 Chr1 - View
Cardamine hirsuta CARHR127540 serine carboxypeptidase-like 46 Chr4 - View
Capsella rubella Carub.0004s1516 PTHR11802//PTHR11802:SF82 - SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE // SERINE CARBOXYPEPTIDASE-LIKE 45-RELATED scaffold_4 - View
Davidia involucrata Dinv27085 GWHABJS00000014 - View
Erigeron canadensis ECA232G0767 Conyza_canadensis_scaffold:2 - View
Eucalyptus grandis Eucgr.B03549 Chr02 + View
Eutrema salsugineum Thhalv10016623m.g PTHR11802:SF82 - SERINE CARBOXYPEPTIDASE-LIKE 45-RELATED scaffold_10 - View
Gossypium hirsutum Gohir.D06G129600 PTHR11802//PTHR11802:SF90 - SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE // SERINE CARBOXYPEPTIDASE-LIKE 31-RELATED D06 + View
Lonicera japonica Lj6C836T7 GWHAAZE00000006 + View
Punica granatum PGR102G1552 NC_045129.1 - View
Schrenkiella parvula Sp1g24300 PTHR11802:SF82 - SERINE CARBOXYPEPTIDASE-LIKE 45-RELATED ch1-1 - View
Schrenkiella parvula Sp4g15870 PTHR11802:SF82 - SERINE CARBOXYPEPTIDASE-LIKE 45-RELATED ch4-6 - View
Theobroma cacao Thecc.02G194500 Serine carboxypeptidase-like 45 Chromosome_2 - View
Tarenaya hassleriana THA.LOC104820534 serine carboxypeptidase-like 45 isoform X1 NW_010966274.1 - View
Trifolium pratense TPR.G12776 Tp57577_TGAC_v2_LG3 - View
Tripterygium wilfordii TWI36G0112 NC_052237.1 - View