Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT4G28770 Tetraspanin family protein Tetraspanin family protein%3B FUNCTIONS IN: molecular_function unknown%3B LOCATED IN: plasma membrane%2C vacuole%2C membrane%3B EXPRESSED IN: 26 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499)%3B BEST Arabidopsis thaliana protein match is: Tetraspanin family protein (TAIR:AT2G20230.1)%3B Has 163 Blast hits to 163 proteins in 17 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 162%3B Viruses - 0%3B Other Eukaryotes - 1 (source: NCBI BLink). Tetraspanin family protein%3B CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499)%3B BEST Arabidopsis thaliana protein match is: Tetraspanin family protein (TAIR:AT2G20230.1). Chr4 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G21600 LG-2 + View
Aethionema arabicum Aa31LG8G17230 LG-8 + View
Acer truncatum Atru.chr5.1924 chr5 - View
Actinidia chinensis Actinidia09496 Lachesis_group15 + View
Arabidopsis lyrata AL3G47860 scaffold_3 - View
Arabidopsis lyrata AL7G23730 scaffold_7 + View
Avicennia marina MSTRG.21445 ScioBoG_26769_HRSCAF_26899 + View
Amaranthus hybridus Ah.15g093420 Tetraspanin-18 (TOM2A homologous protein 2) AmaHy_arrow1_Scaffold_15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.4RWK86 PTHR19282:SF227 - TETRASPANIN-18-RELATED arahy.Tifrunner.gnm1.Arahy.12 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.UVUE9D PTHR19282:SF227 - TETRASPANIN-18-RELATED arahy.Tifrunner.gnm1.Arahy.02 - View
Brassica carinata BcaB03g16814 ChrB03 + View
Brassica carinata BcaNung01365 Contig488 + View
Brassica carinata BcaC06g36698 ChrC06 + View
Brassica napus A07p00520 A07 - View
Brassica napus A01p09140 A01 + View
Brassica napus C07p00970 C07 - View
Brassica napus C01p10730 C01 + View
Brassica oleracea BolC1t01032H C1 + View
Brassica oleracea BolC7t40534H C7 - View
Brassica rapa BraA07t27846Z A07 - View
Brassica rapa BraA01t00860Z A01 + View
Beta vulgaris EL10Ac7g17757 PTHR19282:SF227 - TETRASPANIN-18-RELATED Chr7_EL10_PGA_scaffold5 - View
Cicer arietinum L. Ca_09625_v3 Ca_LG4_v3 + View
Corylus avellana Haze_24740 Similar to TOM2AH2: Tetraspanin-18 (Arabidopsis thaliana OX%3D3702) 8 - View
Coffea canephora Cc01_g17470 Tetraspanin family protein chr1 + View
Citrus clementina Ciclev10021447m.g scaffold_3 + View
Carpinus fangiana Cfa002514 Cfa01 - View
Cardamine hirsuta CARHR110720 Tetraspanin family protein Chr3 + View
Cardamine hirsuta CARHR236560 Tetraspanin family protein Chr7 - View
Carya illinoinensis CiPaw.03G273500 PTHR19282:SF227 - TETRASPANIN-18-RELATED Chr03 - View
Citrullus lanatus ClCG07G001600 Tetraspanin family protein LENGTH=270 CG_Chr07 - View
Cucumis melo MELO3C012812.2 Tetraspanin family protein, putative chr04 + View
Chenopodium quinoa AUR62008854 TOM2AH2: Tetraspanin-18 C_Quinoa_Scaffold_1710 - View
Chenopodium quinoa AUR62025392 TOM2AH2: Tetraspanin-18 C_Quinoa_Scaffold_2773 + View
Capsella rubella Carub.0007s1187 PTHR19282:SF227 - TETRASPANIN-18-RELATED scaffold_7 + View
Capsella rubella Carub.0003s3456 PTHR19282:SF227 - TETRASPANIN-18-RELATED scaffold_3 + View
Cucumis sativus L. CsaV3_3G028600 tetraspanin-18 chr3 - View
Davidia involucrata Dinv43036 GWHABJS00000085 + View
Davidia involucrata Dinv19245 GWHABJS00000010 + View
Durio zibethinus Duzib211G0517 NW_019168049.1 - View
Durio zibethinus Duzib133G0186 NW_019167938.1 - View
Durio zibethinus Duzib138G1947 NW_019167893.1 - View
Erigeron canadensis ECA236G3887 Conyza_canadensis_scaffold:3 + View
Erythranthe guttata Migut.D00500 scaffold_4 - View
Eutrema salsugineum Thhalv10025947m.g PTHR19282:SF227 - TETRASPANIN-18-RELATED scaffold_1 + View
Eutrema salsugineum Thhalv10002082m.g PTHR19282:SF227 - TETRASPANIN-18-RELATED scaffold_12 + View
Fragaria x ananassa FAN15G3151 PTHR19282//PTHR19282:SF227 - TETRASPANIN // TETRASPANIN-18-RELATED Fvb2-4 + View
Fragaria x ananassa FAN27G2714 PTHR19282:SF227 - TETRASPANIN-18-RELATED Fvb2-1 + View
Fragaria vesca FvH4_2g19890 PTHR19282:SF227 - TETRASPANIN-18-RELATED Fvb2 + View
Gossypium hirsutum Gohir.D08G210700 PTHR19282:SF227 - TETRASPANIN-18-RELATED D08 - View
Gossypium hirsutum Gohir.A08G192700 PTHR19282:SF227 - TETRASPANIN-18-RELATED A08 - View
Glycine max Glyma.10G042400 PTHR19282:SF227 - TETRASPANIN-18-RELATED Gm10 - View
Glycine max Glyma.13G129800 PTHR19282:SF227 - TETRASPANIN-18-RELATED Gm13 - View
Gossypium raimondii Gorai.004G223400 Chr04 - View
Helianthus annuus HanXRQChr13g0409011 Putative tetraspanin/Peripherin HanXRQChr13 - View
Lupinus albus Lalb_Chr06g0170931 PTHR19282//PTHR19282:SF227 - TETRASPANIN // TETRASPANIN-18-RELATED Lalb_Chr06 - View
Lupinus albus Lalb_Chr21g0314211 PTHR19282//PTHR19282:SF227 - TETRASPANIN // TETRASPANIN-18-RELATED Lalb_Chr21 - View
Lotus japonicus Lj5g0023490 PTHR19282:SF227 - TETRASPANIN-18-RELATED chr5 + View
Lonicera japonica Lj2A1137G49 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_8_90320 PTHR19282:SF227 - TETRASPANIN-18-RELATED Lsat_1_v8_lg_8 + View
Lactuca sativa Lsat_1_v5_gn_9_11260 Lsat_1_v8_lg_9 - View
Malus domestica MD10G1171300 Tetraspanin family protein Chr10 + View
Malus domestica MD05G1183500 Tetraspanin family protein Chr05 + View
Manihot esculenta Manes.13G042700 Chromosome13 - View
Manihot esculenta Manes.12G040500 Chromosome12 - View
Medicago truncatula Medtr1g069185 tetraspanin family protein chr1 + View
Nelumbo nucifera Nn1g03082 chr1 - View
Olea europaea Oeu052103.3 chr4 - View
Olea europaea Oeu015448.1 chr22 - View
Punica granatum PGR044G2696 NC_045134.1 + View
Prunus persica Prupe.8G209700 PTHR19282:SF227 - TETRASPANIN-18-RELATED Pp08 + View
Populus trichocarpa Potri.006G241400 PTHR19282//PTHR19282:SF239 - TETRASPANIN // SUBFAMILY NOT NAMED Chr06 + View
Populus trichocarpa Potri.002G253500 PTHR19282:SF227 - TETRASPANIN-18-RELATED Chr02 + View
Phaseolus vulgaris Phvul.007G155900 Chr07 - View
Rosa chinensis RcHm_v2.0_Chr6g0285581 RcHm_v2.0_Chr6 + View
Salix brachista Sabra02G0192600 GWHAAZH00000002 + View
Salix brachista Sabra06G0188800 GWHAAZH00000006 + View
Sechium edule Sed0023058 LG01 + View
Solanum lycopersicum Solyc09g063070.3 Tetraspanin/Peripherin (AHRD V3.3 *** A0A200PVL6_9MAGN) SL4.0ch09 + View
Schrenkiella parvula Sp3g33460 PTHR19282//PTHR19282:SF227 - TETRASPANIN // TETRASPANIN-18-RELATED ch3-6 + View
Schrenkiella parvula Sp7g26780 PTHR19282//PTHR19282:SF227 - TETRASPANIN // TETRASPANIN-18-RELATED ch7-5 - View
Solanum pennellii Sopen09g025240 Tetraspanin family protein | LOCATED IN: plasma membrane, vacuole | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 16 growth stages | CONTAINS InterPro DOMAIN/s: Tetraspanin , Tetraspanin, subgroup | BEST Arabidopsis thaliana protein match is: Tetraspanin family protein Spenn-ch09 + View
Solanum tuberosum PGSC0003DMG400018947 Conserved gene of unknown function ST4.03ch09 + View
Selenicereus undatus Hund05500 Scaffold_19641 + View
Trochodendron aralioides TAR636G3136 group1 + View
Trochodendron aralioides TAR365G0159 group16 + View
Theobroma cacao Thecc.01G245000 Tetraspanin family protein Chromosome_1 + View
Theobroma cacao Thecc.09G040900 Chromosome_9 - View
Tarenaya hassleriana THA.LOC104804027 tetraspanin-20 NW_010971389.1 + View
Tarenaya hassleriana THA.LOC104814546 tetraspanin-18 NW_010965451.1 - View
Tripterygium wilfordii TWI59G0887 NC_052248.1 - View
Tripterygium wilfordii TWI23G0488 NC_052239.1 - View
Vigna mungo VMungo0720G0795 CM024071.1 - View
Vitis vinifera GSVIVG01028484001 chr7 - View