Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL1G46560 scaffold_1 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG9G15430 LG-9 - View
Aethionema arabicum Aa31LG2G13640 LG-2 - View
Aquilegia oxysepala Aqoxy3G02289 CHR03 - View
Arabidopsis thaliana AT1G32361 RING/U-box superfamily protein Putative RING-H2 finger protein ATL1F precursor. ATL1F%3B FUNCTIONS IN: zinc ion binding%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G35420.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT2G35420 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G17920.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr2 - View
Brassica carinata BcaB06g28842 ChrB06 - View
Brassica carinata BcaC02g11647 ChrC02 - View
Brassica carinata BcaC02g07714 ChrC02 + View
Brassica carinata BcaC05g27273 ChrC05 + View
Brassica carinata BcaB07g32920 ChrB07 + View
Brassica carinata BcaB02g09432 ChrB02 + View
Brassica napus C05p31810 C05 + View
Brassica napus C04p12760 C04 + View
Brassica napus A05p10320 A05 + View
Brassica napus C04p64300 C04 - View
Brassica napus A09p33800 A09 - View
Brassica napus A04p26910 A04 - View
Brassica oleracea BolC5t31910H C5 + View
Brassica oleracea BolC4t27917H C4 - View
Brassica rapa BraA04t18190Z A04 - View
Brassica rapa BraA05t19970Z A05 + View
Brassica rapa BraA09t38930Z A09 - View
Cardamine hirsuta CARHR129580 RING finger-like protein Chr4 - View
Cardamine hirsuta CARHR031740 RING finger protein Chr1 + View
Carya illinoinensis CiPaw.12G065000 K10664 - E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:6.3.2.19] (ATL6S) Chr12 - View
Cucumis melo MELO3C003422.2 RING-H2 finger protein ATL29-like chr04 - View
Capsella rubella Carub.0004s1710 KOG1493 - Anaphase-promoting complex (APC), subunit 11 scaffold_4 - View
Capsella rubella Carub.0001s3074 KOG1493//KOG4172 - Anaphase-promoting complex (APC), subunit 11 // Predicted E3 ubiquitin ligase scaffold_1 + View
Cucumis sativus L. CsaV3_3G049040 RING-H2 finger protein ATL29 chr3 + View
Durio zibethinus Duzib084G1131 NW_019167827.1 + View
Durio zibethinus Duzib068G0996 NW_019167838.1 + View
Eucalyptus grandis Eucgr.D02209 Chr04 - View
Eutrema salsugineum Thhalv10009642m.g KOG1493//KOG4172 - Anaphase-promoting complex (APC), subunit 11 // Predicted E3 ubiquitin ligase scaffold_5 - View
Eutrema salsugineum Thhalv10017563m.g PTHR14155 - RING FINGER DOMAIN-CONTAINING scaffold_10 - View
Gossypium hirsutum Gohir.A12G207700 PF13639 - Ring finger domain (zf-RING_2) A12 + View
Gossypium hirsutum Gohir.A08G155750 PF00642//PF13639 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // Ring finger domain (zf-RING_2) A08 + View
Gossypium raimondii Gorai.004G184200 Chr04 + View
Gossypium raimondii Gorai.008G225700 Chr08 + View
Lupinus albus Lalb_Chr16g0381281 PF13639 - Ring finger domain (zf-RING_2) Lalb_Chr16 + View
Lupinus albus Lalb_Chr05g0215941 PF13639 - Ring finger domain (zf-RING_2) Lalb_Chr05 + View
Lonicera japonica Lj2P236T40 GWHAAZE00000002 + View
Nicotiana tabacum Nitab4.5_0000556g0020 Unknown Nitab4.5_0000556 - View
Punica granatum PGR031G0838 NC_045127.1 + View
Populus trichocarpa Potri.003G093500 PF13639 - Ring finger domain (zf-RING_2) Chr03 - View
Sechium edule Sed0020036 LG01 - View
Solanum lycopersicum Solyc08g005110.1 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1N0W0_ARTAN) SL4.0ch08 - View
Schrenkiella parvula Sp4g17640 PF13639 - Ring finger domain (zf-RING_2) ch4-6 - View
Tarenaya hassleriana THA.LOC104814701 RING-H2 finger protein ATL81-like NW_010965451.1 + View
Tripterygium wilfordii TWI81G0765 NC_052251.1 - View