Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL1G41720 scaffold_1 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG9G13620 LG-9 - View
Arabidopsis thaliana AT2G33730 P-loop containing nucleoside triphosphate hydrolases superfamily protein P-loop containing nucleoside triphosphate hydrolases superfamily protein%3B FUNCTIONS IN: helicase activity%2C nucleic acid binding%2C ATP binding%2C ATP-dependent helicase activity%3B LOCATED IN: nucleus%2C cytoplasm%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA helicase%2C DEAD-box type%2C Q motif (InterPro:IPR014014)%2C DNA/RNA helicase%2C DEAD/DEAH box type%2C N-terminal (InterPro:IPR011545)%2C RNA helicase%2C ATP-dependent%2C DEAD-box%2C conserved site (InterPro:IPR000629)%2C DEAD-like helicase%2C N-terminal (InterPro:IPR014001)%2C DNA/RNA helicase%2C C-terminal (InterPro:IPR001650)%2C Helicase%2C superfamily 1/2%2C ATP-binding domain (InterPro:IPR014021)%3B BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G28180.1)%3B Has 125674 Blast hits to 72393 proteins in 3317 species: Archae - 1039%3B Bacteria - 55089%3B Metazoa - 31149%3B Fungi - 11223%3B Plants - 5926%3B Viruses - 327%3B Other Eukaryotes - 20921 (source: NCBI BLink). Chr2 - View
Arabidopsis thaliana AT1G28180 DEAD-box ATP-dependent RNA helicase-like protein P-loop containing nucleoside triphosphate hydrolases superfamily protein%3B FUNCTIONS IN: helicase activity%2C ATP-dependent helicase activity%2C nucleic acid binding%2C ATP binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B CONTAINS InterPro DOMAIN/s: DNA/RNA helicase%2C DEAD/DEAH box type%2C N-terminal (InterPro:IPR011545)%2C RNA helicase%2C ATP-dependent%2C DEAD-box%2C conserved site (InterPro:IPR000629)%2C DEAD-like helicase%2C N-terminal (InterPro:IPR014001)%2C DNA/RNA helicase%2C C-terminal (InterPro:IPR001650)%2C Helicase%2C superfamily 1/2%2C ATP-binding domain (InterPro:IPR014021)%3B BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G33730.1)%3B Has 41935 Blast hits to 41307 proteins in 3020 species: Archae - 790%3B Bacteria - 20440%3B Metazoa - 6535%3B Fungi - 4421%3B Plants - 2648%3B Viruses - 20%3B Other Eukaryotes - 7081 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaB01g03920 ChrB01 + View
Brassica carinata BcaB06g28715 ChrB06 + View
Brassica carinata BcaB02g10585 ChrB02 - View
Brassica carinata BcaC02g07814 ChrC02 - View
Brassica carinata BcaC01g05827 ChrC01 + View
Brassica napus C04p63230 C04 - View
Brassica napus A03p18880 A03 - View
Brassica napus C03p22020 C03 - View
Brassica napus A04p25940 A04 - View
Brassica oleracea BolC3t14585H C3 - View
Brassica oleracea BolC4t27797H C4 - View
Brassica rapa BraA04t18097Z A04 - View
Brassica rapa BraA03t11148Z A03 - View
Cardamine hirsuta CARHR127740 ATP-dependent RNA helicase Chr4 - View
Cardamine hirsuta CARHR027670 ATP-dependent RNA helicase Chr1 - View
Capsella rubella Carub.0004s1536 K12858 - ATP-dependent RNA helicase DDX23/PRP28 (DDX23, PRP28) scaffold_4 - View
Capsella rubella Carub.0001s2662 K12858 - ATP-dependent RNA helicase DDX23/PRP28 (DDX23, PRP28) scaffold_1 - View
Eutrema salsugineum Thhalv10016306m.g K12858 - ATP-dependent RNA helicase DDX23/PRP28 (DDX23, PRP28) scaffold_10 - View
Fragaria vesca FvH4_5g26270 K12811 - ATP-dependent RNA helicase DDX46/PRP5 (DDX46, PRP5) Fvb5 + View
Papaver somniferum PSO063G4518 NC_039364.1 + View
Schrenkiella parvula Sp4g16070 K12858 - ATP-dependent RNA helicase DDX23/PRP28 (DDX23, PRP28) ch4-6 - View
Schrenkiella parvula Sp1g24370 PF00271//PF04851 - Helicase conserved C-terminal domain (Helicase_C) // Type III restriction enzyme, res subunit (ResIII) ch1-1 - View