Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL1G17430 scaffold_1 + View
AL5G26320 scaffold_5 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G6810 LG-5 + View
Acer truncatum Atru.chr12.3 chr12 - View
Actinidia chinensis Actinidia25154 Lachesis_group20 + View
Avicennia marina MSTRG.8318 ScioBoG_102841_HRSCAF_103114 - View
Amaranthus hybridus Ah.08g221010 AmaHy_arrow1_Scaffold_8 - View
Aquilegia oxysepala Aqoxy4G02635 CHR04 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.NG6CAB PF13432 - Tetratricopeptide repeat (TPR_16) arahy.Tifrunner.gnm1.Arahy.11 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.ARK6P9 PF13432 - Tetratricopeptide repeat (TPR_16) arahy.Tifrunner.gnm1.Arahy.01 - View
Arabidopsis thaliana AT1G07280 Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B FUNCTIONS IN: binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990)%2C Tetratricopeptide repeat-containing (InterPro:IPR013026)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29670.1)%3B Has 604 Blast hits to 369 proteins in 73 species: Archae - 4%3B Bacteria - 161%3B Metazoa - 2%3B Fungi - 2%3B Plants - 383%3B Viruses - 0%3B Other Eukaryotes - 52 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT2G29670 Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B FUNCTIONS IN: binding%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990)%2C Tetratricopeptide repeat-containing (InterPro:IPR013026)%2C Tetratricopeptide repeat (InterPro:IPR019734)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G07280.3)%3B Has 535 Blast hits to 340 proteins in 62 species: Archae - 10%3B Bacteria - 119%3B Metazoa - 2%3B Fungi - 0%3B Plants - 351%3B Viruses - 0%3B Other Eukaryotes - 53 (source: NCBI BLink). Chr2 - View
Brassica carinata BcaB02g10275 ChrB02 - View
Brassica carinata BcaC07g42456 ChrC07 + View
Brassica carinata BcaC02g08070 ChrC02 + View
Brassica carinata BcaC07g42011 ChrC07 - View
Brassica carinata BcaC02g11052 ChrC02 - View
Brassica carinata BcaB06g28323 ChrB06 - View
Brassica napus A05p15710 A05 + View
Brassica napus C03p71360 C03 - View
Brassica napus C08p50680 C08 - View
Brassica napus A10p05850 A10 + View
Brassica napus C04p58760 C04 - View
Brassica napus C04p21130 C04 + View
Brassica napus C05p05350 C05 + View
Brassica napus A04p22590 A04 - View
Brassica oleracea BolC8t52596H C8 - View
Brassica oleracea BolC4t27394H C4 - View
Brassica oleracea BolC5t29307H C5 + View
Brassica oleracea BolC4t23638H C4 + View
Brassica rapa BraA04t17804Z A04 - View
Brassica rapa BraA10t42846Z A10 + View
Brassica rapa BraA05t20485Z A05 + View
Brassica rapa BraA06t25120Z A06 + View
Brassica rapa BraA09t41989Z A09 - View
Beta vulgaris EL10Ac2g04803 Chr2_EL10_PGA_scaffold6 - View
Beta vulgaris EL10Ac7g16142 PF13432 - Tetratricopeptide repeat (TPR_16) Chr7_EL10_PGA_scaffold5 - View
Camellia sinensis var. sinensis CSS0017469 PREDICTED: uncharacterized protein LOC100253483 [Vitis vinifera] Chr11 - View
Capsicum annuum CAN.G394.116 PGAv.1.6.scaffold394 - View
Cannabis sativa CANSAT54G2602 NC_044375.1 - View
Cicer arietinum L. Ca_14921_v3 Ca_LG5_v3 - View
Corylus avellana Haze_24272 Protein of unknown function 6 - View
Corylus avellana Haze_17195 Protein of unknown function 11 - View
Coffea canephora Cc01_g14040 Tetratricopeptide repeat (TPR)-like superfamily protein chr1 - View
Coffea canephora Cc02_g06800 Putative Tetratricopeptide repeat (TPR)-like superfamily protein chr2 + View
Citrus clementina Ciclev10031175m.g scaffold_4 - View
Citrus clementina Ciclev10028157m.g scaffold_8 - View
Cardamine hirsuta CARHR007000 Tetratricopeptide repeat (TPR)-like superfamily protein Chr1 + View
Cardamine hirsuta CARHR123000 Tetratricopeptide repeat (TPR)-like superfamily protein Chr4 - View
Carya illinoinensis CiPaw.14G060200 PF13432 - Tetratricopeptide repeat (TPR_16) Chr14 + View
Carya illinoinensis CiPaw.13G079900 PF13432 - Tetratricopeptide repeat (TPR_16) Chr13 + View
Carya illinoinensis CiPaw.02G190800 Chr02 - View
Citrullus lanatus ClCG02G019650 Tetratricopeptide repeat (TPR)-like superfamily protein LENGTH=552 CG_Chr02 + View
Cucumis melo MELO3C020557.2 Tetratricopeptide repeat (TPR)-like superfamily protein chr12 + View
Cucumis melo MELO3C025863.2 Tetratricopeptide repeat (TPR)-like superfamily protein chr11 - View
Corchorus olitorius COL.COLO4_19120 RNA-processing protein%2C HAT helix AWUE01016548.1 - View
Carica papaya Cpa.g.sc19.205 supercontig_19 - View
Carica papaya Cpa.g.sc112.43 supercontig_112 + View
Chenopodium quinoa AUR62001672 Protein of unknown function C_Quinoa_Scaffold_2716 + View
Chenopodium quinoa AUR62022856 Protein of unknown function C_Quinoa_Scaffold_3378 - View
Chenopodium quinoa AUR62012224 Protein of unknown function C_Quinoa_Scaffold_1995 - View
Chenopodium quinoa AUR62020109 Protein of unknown function C_Quinoa_Scaffold_2465 - View
Capsella rubella Carub.0001s0658 PF13432 - Tetratricopeptide repeat (TPR_16) scaffold_1 + View
Capsella rubella Carub.0004s1077 PF13432 - Tetratricopeptide repeat (TPR_16) scaffold_4 - View
Capsella rubella Carub.0005s1332 scaffold_5 - View
Cucumis sativus L. CsaV3_6G016330 Tetratricopeptide repeat (TPR)-like superfamily protein chr6 + View
Cucumis sativus L. CsaV3_1G036110 Tetratricopeptide repeat (TPR)-like superfamily protein chr1 - View
Daucus carota DCAR_011796 hypothetical protein DCARv2_Chr3 - View
Daucus carota DCAR_007385 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv28626 GWHABJS00000010 - View
Davidia involucrata Dinv14456 GWHABJS00000007 - View
Davidia involucrata Dinv34413 GWHABJS00000009 - View
Durio zibethinus Duzib150G0302 NW_019167882.1 - View
Durio zibethinus Duzib170G0547 NW_019167871.1 + View
Durio zibethinus Duzib114G0515 NW_019167926.1 + View
Durio zibethinus Duzib168G1084 NW_019168159.1 + View
Erigeron canadensis ECA236G1132 Conyza_canadensis_scaffold:3 - View
Erigeron canadensis ECA248G2839 Conyza_canadensis_scaffold:9 - View
Eucalyptus grandis Eucgr.J01924 Chr10 + View
Erythranthe guttata Migut.N00811 scaffold_14 - View
Eutrema salsugineum Thhalv10016462m.g PF13432 - Tetratricopeptide repeat (TPR_16) scaffold_10 - View
Eutrema salsugineum Thhalv10007265m.g PF13432 - Tetratricopeptide repeat (TPR_16) scaffold_5 - View
Fragaria x ananassa FAN06G0884 Fvb7-2 - View
Fragaria x ananassa FAN25G2662 PF13432 - Tetratricopeptide repeat (TPR_16) Fvb3-1 - View
Fragaria x ananassa FAN11G2938 PF13432 - Tetratricopeptide repeat (TPR_16) Fvb3-4 + View
Fragaria x ananassa FAN01G0590 Fvb7-4 + View
Fragaria x ananassa FAN16G2422 PF13432 - Tetratricopeptide repeat (TPR_16) Fvb3-3 - View
Fragaria x ananassa FAN21G1374 PF13432 - Tetratricopeptide repeat (TPR_16) Fvb3-2 - View
Fragaria vesca FvH4_7g24140 Fvb7 - View
Fragaria vesca FvH4_3g38330 PF13432 - Tetratricopeptide repeat (TPR_16) Fvb3 - View
Gossypium hirsutum Gohir.A07G103500 A07 - View
Gossypium hirsutum Gohir.D03G117200 D03 + View
Gossypium hirsutum Gohir.A03G050200 A03 - View
Gossypium hirsutum Gohir.D07G107300 D07 - View
Glycine max Glyma.18G066500 PF13432 - Tetratricopeptide repeat (TPR_16) Gm18 - View
Gossypium raimondii Gorai.003G123600 Chr03 + View
Gossypium raimondii Gorai.001G115400 Chr01 - View
Helianthus annuus HanXRQChr08g0229551 Putative 43kDa postsynaptic protein HanXRQChr08 + View
Hydrangea macrophylla Hma1.2p1_0227F.1_g096400 Hma1.2p1_0227F.1 - View
Lupinus albus Lalb_Chr17g0346671 Lalb_Chr17 - View
Lupinus albus Lalb_Chr18g0052681 Lalb_Chr18 + View
Lupinus albus Lalb_Chr18g0050881 Lalb_Chr18 - View
Lotus japonicus Lj6g0026845 chr6 + View
Lonicera japonica Lj1A952T45 GWHAAZE00000001 - View
Lonicera japonica Lj2A1079T38 GWHAAZE00000002 - View
Lonicera japonica Lj1A140T5 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_8_71080 Lsat_1_v8_lg_8 + View
Lactuca sativa Lsat_1_v5_gn_9_19520 Lsat_1_v8_lg_9 - View
Lactuca sativa Lsat_1_v5_gn_5_171460 Lsat_1_v8_lg_5 - View
Malus domestica MD03G1072800 Tetratricopeptide repeat (TPR)-like superfamily protein Chr03 + View
Malus domestica MD11G1078900 Tetratricopeptide repeat (TPR)-like superfamily protein Chr11 + View
Malus domestica MD01G1148600 Tetratricopeptide repeat (TPR)-like superfamily protein Chr01 - View
Manihot esculenta Manes.02G120700 Chromosome02 + View
Manihot esculenta Manes.01G163200 Chromosome01 + View
Manihot esculenta Manes.07G126800 Chromosome07 - View
Nelumbo nucifera Nn2g11423 chr2 - View
Nelumbo nucifera Nn2g13657 chr2 - View
Petunia axillaris Peaxi162Scf00540g00623 Tetratricopeptide repeat (TPR)-like superfamily protein Peaxi162Scf00540 + View
Punica granatum PGR102G1755 NC_045129.1 - View
Prunus persica Prupe.2G247500 Pp02 - View
Prunus persica Prupe.6G059600 Pp06 + View
Pisum sativum Psat5g160280 Tetratricopeptide repeat-containing chr5LG3 + View
Populus trichocarpa Potri.001G250100 Chr01 - View
Populus trichocarpa Potri.009G044200 Chr09 - View
Phaseolus vulgaris Phvul.008G225600 Chr08 + View
Phaseolus vulgaris Phvul.006G064500 PF13432 - Tetratricopeptide repeat (TPR_16) Chr06 + View
Quercus lobata QL01p037599 1 - View
Rosa chinensis RcHm_v2.0_Chr5g0068901 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim01G0235800 chr01 - View
Rhododendron simsii Rhsim13G0071200 chr13 + View
Salvia bowleyana SalBow6G6781 GWHASIU00000002 - View
Salix brachista Sabra16G0152100 GWHAAZH00000016 - View
Salix brachista Sabra09G0031700 GWHAAZH00000009 - View
Salix brachista Sabra08G0048300 GWHAAZH00000008 - View
Simmondsia chinensis Sc12g0000940 GWHAASQ00000012 - View
Simmondsia chinensis Sc21g0006260 GWHAASQ00000021 - View
Simmondsia chinensis Sc10g0002220 GWHAASQ00000010 - View
Sechium edule Sed0010611 LG01 - View
Sechium edule Sed0017568 LG01 - View
Sechium edule Sed0020893 LG13 - View
Solanum lycopersicum Solyc06g076850.3 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** A0A1P8AMQ5_ARATH) SL4.0ch06 - View
Schrenkiella parvula Sp4g12390 PF13432 - Tetratricopeptide repeat (TPR_16) ch4-6 - View
Schrenkiella parvula Sp1g06030 PF13432 - Tetratricopeptide repeat (TPR_16) ch1-1 + View
Solanum pennellii Sopen06g033240 Tetratricopeptide repeat (TPR)-like superfamily protein | FUNCTIONS IN: binding | LOCATED IN: chloroplast | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical , Tetratricopeptide repeat-containing , Tetratricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch06 - View
Solanum tuberosum PGSC0003DMG400030441 Binding protein ST4.03ch06 - View
Selenicereus undatus Hund04876 Scaffold_19641 + View
Selenicereus undatus Hund13837 Scaffold_33679 - View
Trochodendron aralioides TAR623G0633 group7 - View
Trochodendron aralioides TAR369G0464 group18 + View
Theobroma cacao Thecc.09G304300 Tetratricopeptide repeat-like superfamily protein Chromosome_9 + View
Tarenaya hassleriana THA.LOC104826292 uncharacterized protein LOC104826292 NW_010967707.1 + View
Tarenaya hassleriana THA.LOC104800724 uncharacterized protein LOC104800724 NW_010969548.1 - View
Tarenaya hassleriana THA.LOC104810716 uncharacterized protein LOC104810716 isoform X1 NW_010965304.1 + View
Trifolium pratense TPR.G21163 Tp57577_TGAC_v2_LG3 + View
Tripterygium wilfordii TWI53G0575 NC_052244.1 + View
Vaccinium macrocarpon vmacro02980 Protein of unknown function chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro14587 Protein of unknown function chr7_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0647G0100 CM024073.1 - View
Vigna mungo VMungo0540G1538 CM024075.1 - View
Vanilla planifolia HPP92_018198 Tetratricopeptide repeat (TPR)-like superfamily protein *** CM028158.1 - View
Vitis vinifera GSVIVG01024773001 chr6 - View
Vitis vinifera GSVIVG01032859001 chr13 - View