Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL1G55290 scaffold_1 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G4000 LG-4 - View
Aethionema arabicum Aa31LG8G4970 LG-8 - View
Actinidia chinensis Actinidia35111 Lachesis_group2 + View
Actinidia chinensis Actinidia18910 Lachesis_group9 + View
Avicennia marina MSTRG.9287 ScioBoG_12795_HRSCAF_12848 - View
Avicennia marina MSTRG.4561 ScioBoG_102837_HRSCAF_103074 - View
Arabidopsis thaliana AT3G18130 receptor for activated C kinase 1C Encodes a protein with similarity to mammalian RACKs. RACKs function to shuttle activated protein kinase C to different subcellular sites and may also function as a scaffold through physical interactions with other proteins. RACK1C has no phenotype on its own and probably acts redundantly with RACK1A and RACK1B. receptor for activated C kinase 1C (RACK1C_AT)%3B FUNCTIONS IN: nucleotide binding%3B INVOLVED IN: shoot development%2C root development%3B LOCATED IN: nucleolus%2C heterotrimeric G-protein complex%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C WD40 repeat%2C conserved site (InterPro:IPR019775)%2C WD40 repeat (InterPro:IPR001680)%2C G-protein beta WD-40 repeat%2C region (InterPro:IPR020472)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: receptor for activated C kinase 1B (TAIR:AT1G48630.1)%3B Has 88582 Blast hits to 37057 proteins in 965 species: Archae - 74%3B Bacteria - 10338%3B Metazoa - 34853%3B Fungi - 20136%3B Plants - 11319%3B Viruses - 6%3B Other Eukaryotes - 11856 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT1G48630 receptor for activated C kinase 1B Encodes a protein with similarity to mammalian RACKs. RACKs function to shuttle activated protein kinase C to different subcellular sites and may also function as a scaffold through physical interactions with other proteins. RACK1B has no phenotype on its own and probably acts redundantly with RACK1A and RACK1C. receptor for activated C kinase 1B (RACK1B_AT)%3B FUNCTIONS IN: nucleotide binding%3B INVOLVED IN: shoot development%2C root development%3B LOCATED IN: cytosolic ribosome%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C WD40 repeat%2C conserved site (InterPro:IPR019775)%2C WD40 repeat (InterPro:IPR001680)%2C G-protein beta WD-40 repeat%2C region (InterPro:IPR020472)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: receptor for activated C kinase 1C (TAIR:AT3G18130.1)%3B Has 89864 Blast hits to 37441 proteins in 950 species: Archae - 80%3B Bacteria - 10219%3B Metazoa - 35696%3B Fungi - 20361%3B Plants - 11462%3B Viruses - 9%3B Other Eukaryotes - 12037 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaC07g37117 ChrC07 + View
Brassica carinata BcaC09g48768 ChrC09 - View
Brassica carinata BcaB04g20796 ChrB04 + View
Brassica carinata BcaC08g43071 ChrC08 - View
Brassica carinata BcaB07g33726 ChrB07 + View
Brassica carinata BcaB04g17391 ChrB04 + View
Brassica napus A01p36280 A01 + View
Brassica napus A08p04560 A08 + View
Brassica napus C08p04890 C08 + View
Brassica napus C06p03270 C06 - View
Brassica napus A06p04290 A06 + View
Brassica napus C05p48050 C05 + View
Brassica napus C01p46090 C01 + View
Brassica napus C05p47440 C05 - View
Brassica napus A05p31670 A05 + View
Brassica oleracea BolC8t47289H C8 + View
Brassica oleracea BolC6t35460H C6 - View
Brassica oleracea BolC5t33512H C5 + View
Brassica oleracea BolC1t04571H C1 + View
Brassica rapa BraA06t23633Z A06 + View
Brassica rapa BraA08t32484Z A08 + View
Brassica rapa BraA05t22000Z A05 + View
Brassica rapa BraA01t03701Z A01 + View
Camellia sinensis var. sinensis CSS0037013 unnamed protein product [Coffea canephora] Chr15 - View
Camellia sinensis var. sinensis CSS0043545 unnamed protein product [Coffea canephora] Chr2 - View
Capsicum annuum CAN.G1129.30 PGAv.1.6.scaffold1129 + View
Capsicum annuum CAN.G423.20 PGAv.1.6.scaffold423 - View
Cannabis sativa CANSAT80G1778 NC_044372.1 + View
Cicer arietinum L. Ca_17219_v3 Ca_LG6_v3 - View
Corylus avellana Haze_18791 Similar to GB1: Guanine nucleotide-binding protein subunit beta-like protein (Medicago sativa OX%3D3879) 7 + View
Coffea canephora Cc04_g06620 Guanine nucleotide-binding protein subunit beta-like protein chr4 + View
Citrus clementina Ciclev10008909m.g scaffold_1 - View
Carpinus fangiana Cfa019697 Cfa08 - View
Cardamine hirsuta CARHR038260 Guanine nucleotide-binding protein subunit beta-like protein Chr1 - View
Cardamine hirsuta CARHR093430 Guanine nucleotide-binding protein subunit beta-like protein Chr3 - View
Carya illinoinensis CiPaw.16G090900 K14753 - guanine nucleotide-binding protein subunit beta-2-like 1 protein (RACK1) Chr16 + View
Carya illinoinensis CiPaw.15G139200 K14753 - guanine nucleotide-binding protein subunit beta-2-like 1 protein (RACK1) Chr15 + View
Citrullus lanatus ClCG06G014460 Guanine nucleotide-binding protein subunit beta-like protein CG_Chr06 - View
Cucumis melo MELO3C017338.2 Guanine nucleotide-binding protein subunit beta-like protein chr02 + View
Carica papaya Cpa.g.sc3.429 supercontig_3 + View
Chenopodium quinoa AUR62029956 GB1: Guanine nucleotide-binding protein subunit beta-like protein C_Quinoa_Scaffold_3500 + View
Capsella rubella Carub.0003s1785 K14753 - guanine nucleotide-binding protein subunit beta-2-like 1 protein (RACK1) scaffold_3 - View
Capsella rubella Carub.0001s3777 K14753 - guanine nucleotide-binding protein subunit beta-2-like 1 protein (RACK1) scaffold_1 - View
Durio zibethinus Duzib205G1910 NW_019168381.1 - View
Durio zibethinus Duzib068G0723 NW_019167838.1 + View
Durio zibethinus Duzib084G0288 NW_019167827.1 + View
Eucalyptus grandis Eucgr.K02261 Chr11 + View
Eucalyptus grandis Eucgr.B00856 Chr02 + View
Eutrema salsugineum Thhalv10011646m.g K14753 - guanine nucleotide-binding protein subunit beta-2-like 1 protein (RACK1) scaffold_7 + View
Eutrema salsugineum Thhalv10021128m.g K14753 - guanine nucleotide-binding protein subunit beta-2-like 1 protein (RACK1) scaffold_13 + View
Fragaria x ananassa FAN18G4183 K14753 - guanine nucleotide-binding protein subunit beta-2-like 1 protein (RACK1) Fvb5-1 + View
Fragaria x ananassa FAN04G1522 PTHR19868//PTHR19868:SF0 - RECEPTOR FOR ACTIVATED PROTEIN KINASE C RACK1 // GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT BETA-2-LIKE 1 Fvb5-4 + View
Fragaria x ananassa FAN08G2209 K14753 - guanine nucleotide-binding protein subunit beta-2-like 1 protein (RACK1) Fvb5-3 - View
Fragaria x ananassa FAN13G3058 PTHR19868:SF0 - GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT BETA-2-LIKE 1 Fvb5-2 + View
Fragaria vesca FvH4_5g17060 K14753 - guanine nucleotide-binding protein subunit beta-2-like 1 protein (RACK1) Fvb5 + View
Gossypium hirsutum Gohir.D12G268600 K14753 - guanine nucleotide-binding protein subunit beta-2-like 1 protein (RACK1) D12 + View
Gossypium hirsutum Gohir.A12G268200 PTHR19868:SF0 - GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT BETA-2-LIKE 1 A12 + View
Glycine max Glyma.08G051600 K14753 - guanine nucleotide-binding protein subunit beta-2-like 1 protein (RACK1) Gm08 + View
Glycine max Glyma.09G177976 Gm09 - View
Glycine max Glyma.05G243800 K14753 - guanine nucleotide-binding protein subunit beta-2-like 1 protein (RACK1) Gm05 + View
Glycine max Glyma.07G100800 K14753 - guanine nucleotide-binding protein subunit beta-2-like 1 protein (RACK1) Gm07 - View
Gossypium raimondii Gorai.008G288800 Chr08 + View
Hydrangea macrophylla Hma1.2p1_0669F.1_g200320 Hma1.2p1_0669F.1 - View
Lupinus albus Lalb_Chr24g0398021 K14753 - guanine nucleotide-binding protein subunit beta-2-like 1 protein (RACK1) Lalb_Chr24 - View
Lupinus albus Lalb_Chr09g0330511 K14753 - guanine nucleotide-binding protein subunit beta-2-like 1 protein (RACK1) Lalb_Chr09 - View
Lupinus albus Lalb_Chr22g0353321 K14753 - guanine nucleotide-binding protein subunit beta-2-like 1 protein (RACK1) Lalb_Chr22 - View
Lupinus albus Lalb_Chr05g0221861 K14753 - guanine nucleotide-binding protein subunit beta-2-like 1 protein (RACK1) Lalb_Chr05 - View
Lupinus albus Lalb_Chr14g0370791 K14753 - guanine nucleotide-binding protein subunit beta-2-like 1 protein (RACK1) Lalb_Chr14 + View
Lotus japonicus Lj4g0012771 K14753 - guanine nucleotide-binding protein subunit beta-2-like 1 protein (RACK1) chr4 - View
Lonicera japonica Lj5A154G67 GWHAAZE00000005 + View
Lonicera japonica Lj9C421G19 GWHAAZE00000009 - View
Malus domestica MD14G1233800 Transducin/WD40 repeat-like superfamily protein Chr14 + View
Manihot esculenta Manes.14G168700 Chromosome14 + View
Medicago truncatula Medtr8g106790 guanine nucleotide-binding protein beta subunit-like protein chr8 + View
Nicotiana tabacum Nitab4.5_0000150g0090 WD40 repeat, WD40 repeat, conserved site, WD40-repeat-containing domain, WD40/YVTN repeat-like-containing domain, G-protein beta WD-40 repeat Nitab4.5_0000150 - View
Petunia axillaris Peaxi162Scf00207g00023 Guanine nucleotide-binding protein subunit beta-like protein Peaxi162Scf00207 - View
Petunia axillaris Peaxi162Scf00683g00230 Guanine nucleotide-binding protein subunit beta-like protein Peaxi162Scf00683 + View
Punica granatum PGR044G2749 NC_045134.1 - View
Prunus persica Prupe.5G230000 K14753 - guanine nucleotide-binding protein subunit beta-2-like 1 protein (RACK1) Pp05 + View
Populus trichocarpa Potri.012G052700 PTHR19868:SF0 - GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT BETA-2-LIKE 1 Chr12 - View
Populus trichocarpa Potri.015G041600 K14753 - guanine nucleotide-binding protein subunit beta-2-like 1 protein (RACK1) Chr15 - View
Phaseolus vulgaris Phvul.002G327500 K14753 - guanine nucleotide-binding protein subunit beta-2-like 1 protein (RACK1) Chr02 + View
Quercus lobata QL10p027563 10 + View
Rosa chinensis RcHm_v2.0_Chr7g0178791 RcHm_v2.0_Chr7 - View
Rhododendron simsii Rhsim08G0129000 chr08 - View
Striga asiatica SGA_v2.0_scaffold168G38491 scaffold168 - View
Salvia bowleyana SalBow1G6621 GWHASIU00000001 + View
Salix brachista Sabra15G0055500 GWHAAZH00000015 + View
Salix brachista Sabra12G0035100 GWHAAZH00000012 - View
Simmondsia chinensis Sc10g0009330 GWHAASQ00000010 - View
Simmondsia chinensis Sc12g0007370 GWHAASQ00000012 + View
Sechium edule Sed0002179 LG08 + View
Sechium edule Sed0005672 LG12 + View
Solanum lycopersicum Solyc12g040510.2 Guanine nucleotide-binding protein subunit beta-like protein (AHRD V3.3 *** A0A1U8FJH9_CAPAN) SL4.0ch12 + View
Solanum lycopersicum Solyc03g119040.3 LeArcA2 protein containing 7 WD40 repeats SL4.0ch03 - View
Solanum lycopersicum Solyc06g069010.3 LeArcA1 protein containing 7 WD40 repeats SL4.0ch06 + View
Schrenkiella parvula Sp3g16240 K14753 - guanine nucleotide-binding protein subunit beta-2-like 1 protein (RACK1) ch3-1 - View
Schrenkiella parvula Sp1g35600 K14753 - guanine nucleotide-binding protein subunit beta-2-like 1 protein (RACK1) ch1-2 - View
Solanum pennellii Sopen12g020110 Guanine nucleotide-binding protein subunit beta-like protein - Nicotiana plumbaginifolia (Leadwort-leaved tobacco), Encodes a protein with similarity to mammalian RACKs. RACKs function to shuttle activated protein kinase C to different subcellular sites and may also function as a scaffold through physical interactions with other proteins. RACK1B has no phenotype on its own and probably acts redundantly with RACK1A and RACK1C. | receptor for activated C kinase 1B (RACK1B_AT) | FUNCTIONS IN: nucleotide binding | INVOLVED IN: shoot development, root development | LOCATED IN: cytosolic ribosome | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , WD40 repeat, conserved site , WD40 repeat , G-protein beta WD-40 repeat, region , WD40 repeat-like-containing domain , WD40-repeat-containing domain , WD40/YVTN repeat-like-containing domain , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: receptor for activated C kinase 1C Spenn-ch12 + View
Solanum pennellii Sopen06g026300 Guanine nucleotide-binding protein subunit beta-like protein - Nicotiana plumbaginifolia (Leadwort-leaved tobacco), Encodes a protein with similarity to mammalian RACKs. RACKs function to shuttle activated protein kinase C to different subcellular sites and may also function as a scaffold through physical interactions with other proteins. RACK1C has no phenotype on its own and probably acts redundantly with RACK1A and RACK1B. | receptor for activated C kinase 1C (RACK1C_AT) | FUNCTIONS IN: nucleotide binding | INVOLVED IN: shoot development, root development | LOCATED IN: nucleolus, heterotrimeric G-protein complex | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , WD40 repeat, conserved site , WD40 repeat , G-protein beta WD-40 repeat, region , WD40 repeat-like-containing domain , WD40-repeat-containing domain , WD40/YVTN repeat-like-containing domain , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: receptor for activated C kinase 1B Spenn-ch06 + View
Solanum pennellii Sopen03g037930 Guanine nucleotide-binding protein subunit beta-like protein - Nicotiana plumbaginifolia (Leadwort-leaved tobacco), Encodes the Arabidopsis thaliana homolog of the tobacco WD-40 repeat ArcA gene. | ATARCA | FUNCTIONS IN: nucleotide binding | INVOLVED IN: response to cadmium ion | LOCATED IN: cytosolic ribosome, chloroplast, heterotrimeric G-protein complex | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , WD40 repeat, conserved site , WD40 repeat , G-protein beta WD-40 repeat, region , WD40 repeat-like-containing domain , WD40-repeat-containing domain , WD40/YVTN repeat-like-containing domain , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: receptor for activated C kinase 1B Spenn-ch03 - View
Solanum tuberosum PGSC0003DMG401005658 ArcA2 protein ST4.03ch03 - View
Solanum tuberosum PGSC0003DMG400015829 LeArcA1 protein ST4.03ch12 - View
Solanum tuberosum PGSC0003DMG400028795 LeArcA1 protein ST4.03ch06 + View
Selenicereus undatus Hund02334 Scaffold_33678 - View
Trochodendron aralioides TAR622G1362 group8 + View
Trochodendron aralioides TAR374G1111 group12 + View
Theobroma cacao Thecc.03G048300 Transducin/WD40 repeat-like superfamily protein Chromosome_3 - View
Tarenaya hassleriana THA.LOC104821835 receptor for activated C kinase 1B-like NW_010966542.1 - View
Tarenaya hassleriana THA.LOC104812161 receptor for activated C kinase 1A-like NW_010965372.1 + View
Tarenaya hassleriana THA.LOC104820359 receptor for activated C kinase 1B-like NW_010966178.1 - View
Trifolium pratense TPR.G12981 Tp57577_TGAC_v2_LG3 - View
Tripterygium wilfordii TWI60G0185 NC_052246.1 + View
Tripterygium wilfordii TWI15G0360 NC_052247.1 + View
Tripterygium wilfordii TWI81G0596 NC_052251.1 - View
Vaccinium macrocarpon vmacro17792 Similar to GB1: Guanine nucleotide-binding protein subunit beta-like protein (Medicago sativa OX%3D3879) chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0251G1260 CM024069.1 + View
Vigna mungo VMungo0464G1091 CM024077.1 - View
Vitis vinifera GSVIVG01008395001 chr17 + View