Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
C08p52590 C08 - View
C01p10970 C01 - View
C05p02230 C05 + View
A08p20020 A08 - View
C08p10900 C08 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G3120 LG-5 + View
Aethionema arabicum Aa31LG2G21900 LG-2 - View
Arabidopsis lyrata AL7G24030 scaffold_7 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.B4CUFV PTHR31189//PTHR31189:SF1 - FAMILY NOT NAMED // 12S SEED STORAGE PROTEIN CRA1-RELATED arahy.Tifrunner.gnm1.Arahy.06 + View
Arabidopsis thaliana AT4G28520 cruciferin 3 Encodes a 12S seed storage protein that is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. cruciferin 3 (CRU3)%3B FUNCTIONS IN: nutrient reservoir activity%3B INVOLVED IN: response to abscisic acid stimulus%2C embryo development ending in seed dormancy%3B LOCATED IN: protein body%3B EXPRESSED IN: 7 plant structures%3B EXPRESSED DURING: seedling growth%2C seed development stages%3B CONTAINS InterPro DOMAIN/s: 11-S seed storage protein%2C conserved site (InterPro:IPR022379)%2C Cupin%2C RmlC-type (InterPro:IPR011051)%2C Cupin 1 (InterPro:IPR006045)%2C RmlC-like jelly roll fold (InterPro:IPR014710)%2C 11-S seed storage protein%2C plant (InterPro:IPR006044)%3B BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT5G44120.3)%3B Has 6518 Blast hits to 3043 proteins in 462 species: Archae - 6%3B Bacteria - 857%3B Metazoa - 718%3B Fungi - 277%3B Plants - 2299%3B Viruses - 10%3B Other Eukaryotes - 2351 (source: NCBI BLink). Chr4 + View
Brassica carinata BcaC09g51654 ChrC09 + View
Brassica carinata BcaC07g38336 ChrC07 + View
Brassica carinata BcaB03g12577 ChrB03 + View
Brassica oleracea BolC1t01059H C1 - View
Brassica rapa BraA08t33962Z A08 - View
Brassica rapa BraA01t00884Z A01 - View
Cicer arietinum L. Ca_08711_v3 Ca_LG3_v3 - View
Cardamine hirsuta CARHR236300 11S seed storage globulin A Chr7 + View
Carya illinoinensis CiPaw.03G264300 PF00190 - Cupin (Cupin_1) Chr03 + View
Carya illinoinensis CiPaw.04G186700 PF00190 - Cupin (Cupin_1) Chr04 + View
Citrullus lanatus ClCG07G001060 11S seed storage globulin CG_Chr07 + View
Capsella rubella Carub.0001s0302 PTHR31189//PTHR31189:SF1 - FAMILY NOT NAMED // 12S SEED STORAGE PROTEIN CRA1-RELATED scaffold_1 + View
Capsella rubella Carub.0007s1216 PTHR31189//PTHR31189:SF1 - FAMILY NOT NAMED // 12S SEED STORAGE PROTEIN CRA1-RELATED scaffold_7 - View
Erythranthe guttata Migut.D00425 scaffold_4 + View
Eutrema salsugineum Thhalv10027035m.g PTHR31189:SF1 - 12S SEED STORAGE PROTEIN CRA1-RELATED scaffold_1 - View
Glycine max Glyma.10G037100 PTHR31189//PTHR31189:SF1 - FAMILY NOT NAMED // 12S SEED STORAGE PROTEIN CRA1-RELATED Gm10 - View
Glycine max Glyma.03G163400 PTHR31189//PTHR31189:SF1 - FAMILY NOT NAMED // 12S SEED STORAGE PROTEIN CRA1-RELATED Gm03 - View
Hydrangea macrophylla Hma1.2p1_0273F.1_g109680 Hma1.2p1_0273F.1 + View
Manihot esculenta Manes.13G034300 Chromosome13 + View
Manihot esculenta Manes.12G032600 Chromosome12 - View
Nelumbo nucifera Nn1g03035 chr1 + View
Phaseolus vulgaris Phvul.007G192800 PTHR31189:SF1 - 12S SEED STORAGE PROTEIN CRA1-RELATED Chr07 + View
Striga asiatica SGA_v2.0_scaffold1G00617 scaffold1 - View
Sechium edule Sed0008213 LG05 + View
Schrenkiella parvula Sp7g26500 PTHR31189//PTHR31189:SF1 - FAMILY NOT NAMED // 12S SEED STORAGE PROTEIN CRA1-RELATED ch7-5 + View
Schrenkiella parvula Sp1g02740 PTHR31189:SF1 - 12S SEED STORAGE PROTEIN CRA1-RELATED ch1-1 + View
Solanum pennellii Sopen09g028300 Glutelin type-A 2 precursor (Glutelin type II) - Oryza sativa (Rice), Encodes a 12S seed storage protein. The Landsberg erecta genome contains another copy of 12S globulin gene, CRA2, which is located tandemly with CRA1. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. | CRUCIFERINA (CRA1) | FUNCTIONS IN: nutrient reservoir activity | INVOLVED IN: response to abscisic acid stimulus | LOCATED IN: endomembrane system | EXPRESSED IN: guard cell, seed | EXPRESSED DURING: seedling growth, seed development stages | CONTAINS InterPro DOMAIN/s: 11-S seed storage protein, conserved site , Cupin, RmlC-type , Cupin 1 , RmlC-like jelly roll fold , 11-S seed storage protein, plant | BEST Arabidopsis thaliana protein match is: cruciferin 2 Spenn-ch09 + View
Tarenaya hassleriana THA.LOC104824683 cruciferin PGCRURSE5 NW_010966933.1 - View