Functional Clusters
Cluster information
- Cluster identifier CH_lsa_320
- Chromosome Lsat_1_v8_lg_1
- E-value 0.000039909
- Data type MapMan
- Data identifier 19.2.2.1.4.4.4
- Data description Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RBR-type E3 ligase activities.plant-specific E3 ubiquitin ligase (RSL/RFA)
-
Overview
Clusters table overview
Clusters chromosomal overview
Gene Family Statistics
| Gene family | Num genes total | Num genes species | Num genes cluster | Num species |
|---|---|---|---|---|
| HOM05D000327 | 1418 | 11 | 3 | 97 |
| HOM05D006417 | 124 | 3 | 1 | 72 |
| HOM05D000216 | 1874 | 38 | 1 | 88 |
| HOM05D005015 | 148 | 2 | 1 | 42 |
| HOM05D000743 | 785 | 26 | 1 | 85 |
| HOM05D000806 | 732 | 14 | 1 | 82 |
| HOM05D002194 | 306 | 5 | 1 | 58 |
| HOM05D002188 | 306 | 4 | 1 | 99 |
Gene Information
| In cluster | Gene id | Gene type | Gene family |
|---|---|---|---|
| X | Lsat_1_v5_gn_1_38601 | Coding gene | HOM05D000327 |
| X | Lsat_1_v5_gn_1_38621 | Coding gene | HOM05D006417 |
| X | Lsat_1_v5_gn_1_38660 | Coding gene | HOM05D000216 |
| X | Lsat_1_v5_gn_1_38680 | Coding gene | HOM05D005015 |
| X | Lsat_1_v5_gn_1_38700 | Coding gene | HOM05D000743 |
| X | Lsat_1_v5_gn_1_38720 | Coding gene | HOM05D000806 |
| X | Lsat_1_v5_gn_1_38741 | Coding gene | HOM05D002194 |
| X | Lsat_1_v5_gn_1_38881 | Coding gene | HOM05D000327 |
| X | Lsat_1_v5_gn_1_38961 | Coding gene | HOM05D002188 |
| X | Lsat_1_v5_gn_1_39061 | Coding gene | HOM05D000327 |