Functional clusters

Information

  • Type InterPro
  • Description UHRF1/2-like

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr6 5 CH_acertr_802 2 2 0.000211491
Actinidia chinensis Lachesis_group10 5 CH_ach_485 2 2 0.000325928
Arabidopsis lyrata scaffold_2 5 CH_aly_743 2 2 0.000990066
Brassica carinata ChrB08 5 CH_bca_1826 2 2 0.000448905
Capsicum annuum PGAv.1.6.scaffold843 5 CH_can_730 2 2 0.000247831
Cardamine hirsuta Chr6 5 CH_chi_149 4 4 0.000000000124841
Capsella rubella scaffold_6 5 CH_cru_659 2 2 0.000731154
Capsella rubella scaffold_2 5 CH_cru_660 2 2 0.000731154
Erigeron canadensis Conyza_canadensis_scaffold:8 5 CH_eca_551 2 2 0.0000448722
Helianthus annuus HanXRQChr01 5 CH_han_47 7 7 2.07739e-22
Lactuca sativa Lsat_1_v8_lg_3 5 CH_lsa_686 2 3 0.000154198
Nicotiana tabacum Nitab4.5_0000976 5 CH_nta_232 2 2 0.000109727
Pisum sativum chr6LG2 5 CH_psa_126 4 7 0.000000000521525
Rosa chinensis RcHm_v2.0_Chr6 5 CH_rch_660 3 5 0.000000476719
Rhododendron simsii chr08 5 CH_rsi_822 2 2 0.000193592
Solanum lycopersicum SL4.0ch05 5 CH_sly_754 2 2 0.000176082
Solanum pennellii Spenn-ch05 5 CH_spe_154 4 15 0.000000000360282
Trifolium pratense Tp57577_TGAC_v2_LG3 5 CH_tpr_717 2 2 0.000454184
Acer truncatum chr6 6 CH_acertr_802 2 2 0.000211491
Actinidia chinensis Lachesis_group10 6 CH_ach_485 2 2 0.000325928
Arabidopsis lyrata scaffold_2 6 CH_aly_743 2 2 0.000990066
Brassica carinata ChrB08 6 CH_bca_1826 2 2 0.000448905
Capsicum annuum PGAv.1.6.scaffold843 6 CH_can_730 2 2 0.000247831
Cardamine hirsuta Chr6 6 CH_chi_149 4 4 0.000000000124841
Capsella rubella scaffold_6 6 CH_cru_659 2 2 0.000731154
Capsella rubella scaffold_2 6 CH_cru_660 2 2 0.000731154
Erigeron canadensis Conyza_canadensis_scaffold:8 6 CH_eca_551 2 2 0.0000448722
Helianthus annuus HanXRQChr01 6 CH_han_47 7 7 2.07739e-22
Lactuca sativa Lsat_1_v8_lg_3 6 CH_lsa_686 2 3 0.000154198
Nicotiana tabacum Nitab4.5_0000976 6 CH_nta_232 2 2 0.000109727
Pisum sativum chr6LG2 6 CH_psa_126 4 7 0.000000000521525
Rosa chinensis RcHm_v2.0_Chr6 6 CH_rch_660 3 5 0.000000476719
Rhododendron simsii chr08 6 CH_rsi_822 2 2 0.000193592
Solanum lycopersicum SL4.0ch05 6 CH_sly_754 2 2 0.000176082
Solanum pennellii Spenn-ch05 6 CH_spe_154 4 15 0.000000000360282
Trifolium pratense Tp57577_TGAC_v2_LG3 6 CH_tpr_717 2 2 0.000454184

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001