Functional clusters
Information
- Type InterPro
- Description Serine/threonine-protein kinase/endoribonuclease IRE1/2-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr13 | 5 | CH_acertr_304 | 3 | 3 | 0.0000001491 |
| Actinidia chinensis | Lachesis_group11 | 5 | CH_ach_484 | 2 | 2 | 0.000325928 |
| Amborella trichopoda | AmTr_v1.0_scaffold00001 | 5 | CH_atr_115 | 4 | 7 | 0.000000000263177 |
| Capsicum annuum | PGAv.1.6.scaffold1238 | 5 | CH_can_729 | 2 | 2 | 0.000247831 |
| Erigeron canadensis | Conyza_canadensis_scaffold:6 | 5 | CH_eca_229 | 3 | 3 | 0.0000000302034 |
| Eucalyptus grandis | Chr10 | 5 | CH_egr_215 | 7 | 9 | 2.79231e-17 |
| Eucalyptus grandis | Chr03 | 5 | CH_egr_307 | 9 | 60 | 0.0000000000000147942 |
| Gossypium hirsutum | A02 | 5 | CH_ghi_1067 | 2 | 2 | 0.000267016 |
| Lactuca sativa | Lsat_1_v8_lg_2 | 5 | CH_lsa_98 | 5 | 6 | 0.00000000000000659696 |
| Populus trichocarpa | Chr02 | 5 | CH_ptr_701 | 2 | 2 | 0.000346801 |
| Salix brachista | GWHAAZH00000002 | 5 | CH_sbr_560 | 2 | 2 | 0.000189042 |
| Vanilla planifolia | CM028161.1 | 5 | CH_vpl_170 | 3 | 8 | 0.000000458525 |
| Vitis vinifera | chr7 | 5 | CH_vvi_632 | 2 | 2 | 0.000228189 |
| Acer truncatum | chr13 | 6 | CH_acertr_304 | 3 | 3 | 0.0000001491 |
| Actinidia chinensis | Lachesis_group11 | 6 | CH_ach_484 | 2 | 2 | 0.000325928 |
| Amborella trichopoda | AmTr_v1.0_scaffold00001 | 6 | CH_atr_115 | 4 | 7 | 0.000000000263177 |
| Capsicum annuum | PGAv.1.6.scaffold1238 | 6 | CH_can_729 | 2 | 2 | 0.000247831 |
| Erigeron canadensis | Conyza_canadensis_scaffold:6 | 6 | CH_eca_229 | 3 | 3 | 0.0000000302034 |
| Eucalyptus grandis | Chr10 | 6 | CH_egr_215 | 7 | 9 | 2.79231e-17 |
| Eucalyptus grandis | Chr03 | 6 | CH_egr_307 | 9 | 60 | 0.0000000000000147942 |
| Gossypium hirsutum | A02 | 6 | CH_ghi_1067 | 2 | 2 | 0.000267016 |
| Lactuca sativa | Lsat_1_v8_lg_2 | 6 | CH_lsa_98 | 5 | 6 | 0.00000000000000659696 |
| Populus trichocarpa | Chr02 | 6 | CH_ptr_701 | 2 | 2 | 0.000346801 |
| Salix brachista | GWHAAZH00000002 | 6 | CH_sbr_560 | 2 | 2 | 0.000189042 |
| Vanilla planifolia | CM028161.1 | 6 | CH_vpl_170 | 3 | 8 | 0.000000458525 |
| Vitis vinifera | chr7 | 6 | CH_vvi_632 | 2 | 2 | 0.000228189 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |