Functional clusters

Information

  • Type InterPro
  • Description Ubiquitin conjugation factor E4

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group21 5 CH_ach_406 2 2 0.000162964
Amaranthus hybridus AmaHy_arrow1_Scaffold_12 5 CH_amhyb_260 2 2 0.0000841751
Chara braunii BFEA01000167 5 CH_cbr_298 2 4 0.00043153
Fragaria vesca Fvb3 5 CH_fve_657 2 2 0.00017673
Lactuca sativa Lsat_1_v8_lg_8 5 CH_lsa_832 2 2 0.000514007
Pisum sativum chr1LG6 5 CH_psa_150 3 3 0.00000000408165
Quercus lobata CM012294 5 CH_qlo_1017 3 18 0.00000326144
Actinidia chinensis Lachesis_group21 6 CH_ach_406 2 2 0.000162964
Amaranthus hybridus AmaHy_arrow1_Scaffold_12 6 CH_amhyb_260 2 2 0.0000841751
Chara braunii BFEA01000167 6 CH_cbr_298 2 4 0.00043153
Fragaria x ananassa Fvb3-3 6 CH_fan_374 3 3 0.000000287605
Fragaria x ananassa Fvb3-2 6 CH_fan_375 3 3 0.000000287605
Fragaria vesca Fvb3 6 CH_fve_657 2 2 0.00017673
Lactuca sativa Lsat_1_v8_lg_8 6 CH_lsa_832 2 2 0.000514007
Pisum sativum chr1LG6 6 CH_psa_150 3 3 0.00000000408165
Quercus lobata CM012294 6 CH_qlo_1017 3 18 0.00000326144

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001