Functional clusters
Information
- Type InterPro
- Description Calcium permeable stress-gated cation channel 1-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr10 | 5 | CH_acertr_399 | 3 | 3 | 0.00000339203 |
| Acer truncatum | chr3 | 5 | CH_acertr_832 | 3 | 10 | 0.00040604 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.10 | 5 | CH_arhy_755 | 3 | 3 | 0.00000879959 |
| Brassica carinata | ChrB07 | 5 | CH_bca_1045 | 3 | 3 | 0.00000972632 |
| Camellia sinensis var. sinensis | Chr8 | 5 | CH_camsi_1297 | 3 | 11 | 0.000423709 |
| Davidia involucrata | GWHABJS00000020 | 5 | CH_din_271 | 4 | 10 | 0.000000304892 |
| Nelumbo nucifera | chr5 | 5 | CH_nnu_361 | 3 | 6 | 0.0000389499 |
| Quercus lobata | 5 | 5 | CH_qlo_482 | 5 | 8 | 0.000000000034671 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 5 | CH_rch_730 | 3 | 3 | 0.00000133499 |
| Sequoiadendron giganteum | chr10 | 5 | CH_sgi_1280 | 3 | 3 | 0.00000101811 |
| Solanum tuberosum | ST4.03ch02 | 5 | CH_stu_415 | 3 | 3 | 0.00000112662 |
| Selenicereus undatus | Scaffold_33675 | 5 | CH_sun_106 | 3 | 3 | 0.00000174248 |
| Vigna mungo | CM024072.1 | 5 | CH_vmu_245 | 3 | 3 | 0.00000425862 |
| Acer truncatum | chr10 | 6 | CH_acertr_399 | 3 | 3 | 0.00000339203 |
| Acer truncatum | chr3 | 6 | CH_acertr_832 | 3 | 10 | 0.00040604 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.10 | 6 | CH_arhy_755 | 3 | 3 | 0.00000879959 |
| Brassica carinata | ChrB07 | 6 | CH_bca_1045 | 3 | 3 | 0.00000972632 |
| Camellia sinensis var. sinensis | Chr8 | 6 | CH_camsi_1297 | 3 | 11 | 0.000423709 |
| Davidia involucrata | GWHABJS00000020 | 6 | CH_din_271 | 4 | 10 | 0.000000304892 |
| Fragaria x ananassa | Fvb3-2 | 6 | CH_fan_130 | 5 | 6 | 0.0000000000111735 |
| Fragaria x ananassa | Fvb7-1 | 6 | CH_fan_919 | 3 | 6 | 0.000201121 |
| Nelumbo nucifera | chr5 | 6 | CH_nnu_361 | 3 | 6 | 0.0000389499 |
| Quercus lobata | 5 | 6 | CH_qlo_482 | 5 | 8 | 0.000000000034671 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 6 | CH_rch_730 | 3 | 3 | 0.00000133499 |
| Sequoiadendron giganteum | chr10 | 6 | CH_sgi_1280 | 3 | 3 | 0.00000101811 |
| Solanum tuberosum | ST4.03ch02 | 6 | CH_stu_415 | 3 | 3 | 0.00000112662 |
| Selenicereus undatus | Scaffold_33675 | 6 | CH_sun_106 | 3 | 3 | 0.00000174248 |
| Vigna mungo | CM024072.1 | 6 | CH_vmu_245 | 3 | 3 | 0.00000425862 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |