Functional clusters

Information

  • Type InterPro
  • Description Coenzyme A pyrophosphatase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr10 5 CH_acertr_649 2 2 0.000070497
Actinidia chinensis Lachesis_group20 5 CH_ach_483 2 2 0.000325928
Avicennia marina ScioBoG_19538_HRSCAF_19626 5 CH_ama_215 2 2 0.000517331
Aquilegia oxysepala CHR04 5 CH_aox_354 2 2 0.0000801989
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.10 5 CH_arhy_1187 2 2 0.000449075
Beta vulgaris Chr8_EL10_PGA_scaffold4 5 CH_bvu_370 2 2 0.0000827917
Camellia sinensis var. sinensis Chr8 5 CH_camsi_1106 2 2 0.000137564
Capsicum annuum PGAv.1.6.scaffold168 5 CH_can_138 4 4 0.00000000000169153
Corylus avellana 2 5 CH_cav_212 3 3 0.0000000352706
Coffea canephora chr2 5 CH_ccan_477 2 8 0.000119248
Citrus clementina scaffold_2 5 CH_ccl_277 3 3 0.0000000403763
Carpinus fangiana Cfa07 5 CH_cfa_567 2 2 0.000454408
Carya illinoinensis Chr10 5 CH_cil_767 2 2 0.000371897
Carica papaya supercontig_7 5 CH_cpa_418 2 2 0.0000950661
Chenopodium quinoa C_Quinoa_Scaffold_4266 5 CH_cqu_772 2 2 0.000142146
Davidia involucrata GWHABJS00000020 5 CH_din_280 3 5 0.00000037515
Eucalyptus grandis Chr04 5 CH_egr_1291 2 2 0.000351165
Erythranthe guttata scaffold_13 5 CH_egut_676 2 2 0.000436888
Gossypium hirsutum A06 5 CH_ghi_1357 2 2 0.000961256
Gossypium hirsutum D06 5 CH_ghi_1358 2 2 0.000961256
Glycine max Gm13 5 CH_gma_888 2 2 0.000569336
Glycine max Gm15 5 CH_gma_889 2 2 0.000569336
Gossypium raimondii Chr10 5 CH_gra_641 2 2 0.000536107
Lotus japonicus chr6 5 CH_lja_573 2 3 0.000643531
Lonicera japonica GWHAAZE00000002 5 CH_lonja_527 3 5 0.00000107577
Lactuca sativa Lsat_1_v8_lg_4 5 CH_lsa_364 3 4 0.000000158516
Nelumbo nucifera chr1 5 CH_nnu_471 2 2 0.000144505
Oryza sativa ssp. japonica chr08 5 CH_osa_699 2 3 0.000475289
Petunia axillaris Peaxi162Scf00269 5 CH_pax_571 2 2 0.000211067
Prunus persica Pp04 5 CH_ppe_310 3 3 0.0000000333888
Pisum sativum chr1LG6 5 CH_psa_572 2 2 0.00015649
Populus trichocarpa Chr04 5 CH_ptr_301 3 3 0.0000000501143
Phaseolus vulgaris Chr06 5 CH_pvu_553 2 2 0.000220418
Quercus lobata 7 5 CH_qlo_1298 2 2 0.0000516289
Rosa chinensis RcHm_v2.0_Chr5 5 CH_rch_1480 2 2 0.00083717
Rosa chinensis RcHm_v2.0_Chr2 5 CH_rch_1481 2 2 0.00083717
Rhododendron simsii chr13 5 CH_rsi_821 2 2 0.000193592
Salix brachista GWHAAZH00000004 5 CH_sbr_219 3 3 0.0000000238253
Simmondsia chinensis GWHAASQ00000005 5 CH_sci_326 2 2 0.0000851426
Solanum lycopersicum SL4.0ch10 5 CH_sly_237 3 3 0.00000000516764
Solanum pennellii Spenn-ch10 5 CH_spe_199 3 3 0.00000000296764
Solanum tuberosum ST4.03ch10 5 CH_stu_733 2 2 0.000153736
Theobroma cacao Chromosome_6 5 CH_tca_636 2 2 0.000219716
Vaccinium macrocarpon chr9_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_644 2 2 0.000278772
Vigna mungo CM024075.1 5 CH_vmu_478 2 2 0.000193842
Acer truncatum chr10 6 CH_acertr_649 2 2 0.000070497
Actinidia chinensis Lachesis_group20 6 CH_ach_483 2 2 0.000325928
Avicennia marina ScioBoG_19538_HRSCAF_19626 6 CH_ama_215 2 2 0.000517331
Aquilegia oxysepala CHR04 6 CH_aox_354 2 2 0.0000801989
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.10 6 CH_arhy_1187 2 2 0.000449075
Beta vulgaris Chr8_EL10_PGA_scaffold4 6 CH_bvu_370 2 2 0.0000827917
Camellia sinensis var. sinensis Chr8 6 CH_camsi_1106 2 2 0.000137564
Capsicum annuum PGAv.1.6.scaffold168 6 CH_can_138 4 4 0.00000000000169153
Corylus avellana 2 6 CH_cav_212 3 3 0.0000000352706
Coffea canephora chr2 6 CH_ccan_477 2 8 0.000119248
Citrus clementina scaffold_2 6 CH_ccl_277 3 3 0.0000000403763
Carpinus fangiana Cfa07 6 CH_cfa_567 2 2 0.000454408
Carya illinoinensis Chr10 6 CH_cil_767 2 2 0.000371897
Carica papaya supercontig_7 6 CH_cpa_418 2 2 0.0000950661
Chenopodium quinoa C_Quinoa_Scaffold_4266 6 CH_cqu_772 2 2 0.000142146
Davidia involucrata GWHABJS00000020 6 CH_din_280 3 5 0.00000037515
Eucalyptus grandis Chr04 6 CH_egr_1291 2 2 0.000351165
Erythranthe guttata scaffold_13 6 CH_egut_676 2 2 0.000436888
Fragaria x ananassa Fvb3-1 6 CH_fan_1187 2 2 0.00066613
Gossypium hirsutum A06 6 CH_ghi_1357 2 2 0.000961256
Gossypium hirsutum D06 6 CH_ghi_1358 2 2 0.000961256
Glycine max Gm13 6 CH_gma_888 2 2 0.000569336
Glycine max Gm15 6 CH_gma_889 2 2 0.000569336
Gossypium raimondii Chr10 6 CH_gra_641 2 2 0.000536107
Lotus japonicus chr6 6 CH_lja_573 2 3 0.000643531
Lonicera japonica GWHAAZE00000002 6 CH_lonja_527 3 5 0.00000107577
Lactuca sativa Lsat_1_v8_lg_4 6 CH_lsa_364 3 4 0.000000158516
Nelumbo nucifera chr1 6 CH_nnu_471 2 2 0.000144505
Oryza sativa ssp. japonica chr08 6 CH_osa_699 2 3 0.000475289
Petunia axillaris Peaxi162Scf00269 6 CH_pax_571 2 2 0.000211067
Prunus persica Pp04 6 CH_ppe_310 3 3 0.0000000333888
Pisum sativum chr1LG6 6 CH_psa_572 2 2 0.00015649
Populus trichocarpa Chr04 6 CH_ptr_301 3 3 0.0000000501143
Phaseolus vulgaris Chr06 6 CH_pvu_553 2 2 0.000220418
Quercus lobata 7 6 CH_qlo_1298 2 2 0.0000516289
Rosa chinensis RcHm_v2.0_Chr5 6 CH_rch_1480 2 2 0.00083717
Rosa chinensis RcHm_v2.0_Chr2 6 CH_rch_1481 2 2 0.00083717
Rhododendron simsii chr13 6 CH_rsi_821 2 2 0.000193592
Salix brachista GWHAAZH00000004 6 CH_sbr_219 3 3 0.0000000238253
Simmondsia chinensis GWHAASQ00000005 6 CH_sci_326 2 2 0.0000851426
Solanum lycopersicum SL4.0ch10 6 CH_sly_237 3 3 0.00000000516764
Solanum pennellii Spenn-ch10 6 CH_spe_199 3 3 0.00000000296764
Solanum tuberosum ST4.03ch10 6 CH_stu_733 2 2 0.000153736
Theobroma cacao Chromosome_6 6 CH_tca_636 2 2 0.000219716
Vaccinium macrocarpon chr9_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_644 2 2 0.000278772
Vigna mungo CM024075.1 6 CH_vmu_478 2 2 0.000193842

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001