Functional clusters

Information

  • Type InterPro
  • Description Vacuolar protein sorting-associated protein Vps41/Vps8

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00100 5 CH_atr_615 2 3 0.000714919
Capsicum annuum PGAv.1.6.scaffold929 5 CH_can_301 3 3 0.000000102372
Carica papaya supercontig_47 5 CH_cpa_607 2 2 0.000570396
Chenopodium quinoa C_Quinoa_Scaffold_1279 5 CH_cqu_1088 2 2 0.000995025
Hydrangea macrophylla Hma1.2p1_0074F.1 5 CH_hma_130 3 3 0.0000000740453
Lonicera japonica GWHAAZE00000001 5 CH_lonja_957 2 2 0.000179662
Quercus lobata 10 5 CH_qlo_1808 2 2 0.000774433
Quercus lobata 3 5 CH_qlo_1809 2 2 0.000774433
Rosa chinensis RcHm_v2.0_Chr5 5 CH_rch_1291 2 3 0.000358775
Sequoiadendron giganteum chr3 5 CH_sgi_561 4 5 0.00000000000867093
Trochodendron aralioides group0 5 CH_tar_921 2 2 0.000600366
Amborella trichopoda AmTr_v1.0_scaffold00100 6 CH_atr_615 2 3 0.000714919
Capsicum annuum PGAv.1.6.scaffold929 6 CH_can_301 3 3 0.000000102372
Carica papaya supercontig_47 6 CH_cpa_607 2 2 0.000570396
Chenopodium quinoa C_Quinoa_Scaffold_1279 6 CH_cqu_1088 2 2 0.000995025
Fragaria x ananassa Fvb3-2 6 CH_fan_475 3 6 0.00000169449
Hydrangea macrophylla Hma1.2p1_0074F.1 6 CH_hma_130 3 3 0.0000000740453
Lonicera japonica GWHAAZE00000001 6 CH_lonja_957 2 2 0.000179662
Quercus lobata 10 6 CH_qlo_1808 2 2 0.000774433
Quercus lobata 3 6 CH_qlo_1809 2 2 0.000774433
Rosa chinensis RcHm_v2.0_Chr5 6 CH_rch_1291 2 3 0.000358775
Sequoiadendron giganteum chr3 6 CH_sgi_561 4 5 0.00000000000867093
Trochodendron aralioides group0 6 CH_tar_921 2 2 0.000600366

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001