Functional clusters
Information
- Type InterPro
- Description XMAP215 family
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Actinidia chinensis | Lachesis_group17 | 5 | CH_ach_32 | 4 | 4 | 0.00000000000721369 |
Avicennia marina | ScioBoG_19538_HRSCAF_19626 | 5 | CH_ama_179 | 2 | 2 | 0.000258665 |
Amaranthus hybridus | AmaHy_arrow1_Scaffold_9 | 5 | CH_amhyb_342 | 2 | 2 | 0.000252525 |
Coffea canephora | chr2 | 5 | CH_ccan_476 | 2 | 8 | 0.000119248 |
Carica papaya | supercontig_192 | 5 | CH_cpa_469 | 2 | 3 | 0.000285185 |
Davidia involucrata | GWHABJS00000020 | 5 | CH_din_476 | 2 | 2 | 0.0000500125 |
Eucalyptus grandis | Chr04 | 5 | CH_egr_1204 | 2 | 2 | 0.000175582 |
Lupinus albus | Lalb_Chr21 | 5 | CH_lal_142 | 4 | 17 | 0.00000000515795 |
Lonicera japonica | GWHAAZE00000001 | 5 | CH_lonja_438 | 3 | 3 | 0.000000107598 |
Lonicera japonica | GWHAAZE00000002 | 5 | CH_lonja_486 | 3 | 4 | 0.000000430351 |
Magnolia biondii | Chr19 | 5 | CH_mbi_1060 | 3 | 32 | 0.000350175 |
Olea europaea | chr19 | 5 | CH_oeu_600 | 2 | 3 | 0.000480389 |
Oryza sativa ssp. japonica | chr01 | 5 | CH_osa_567 | 2 | 3 | 0.000158433 |
Sapria himalayana | scaffold29_7503565 | 5 | CH_shi_14 | 6 | 12 | 1.27099e-17 |
Actinidia chinensis | Lachesis_group17 | 6 | CH_ach_32 | 4 | 4 | 0.00000000000721369 |
Avicennia marina | ScioBoG_19538_HRSCAF_19626 | 6 | CH_ama_179 | 2 | 2 | 0.000258665 |
Amaranthus hybridus | AmaHy_arrow1_Scaffold_9 | 6 | CH_amhyb_342 | 2 | 2 | 0.000252525 |
Coffea canephora | chr2 | 6 | CH_ccan_476 | 2 | 8 | 0.000119248 |
Carica papaya | supercontig_192 | 6 | CH_cpa_469 | 2 | 3 | 0.000285185 |
Davidia involucrata | GWHABJS00000020 | 6 | CH_din_476 | 2 | 2 | 0.0000500125 |
Eucalyptus grandis | Chr04 | 6 | CH_egr_1204 | 2 | 2 | 0.000175582 |
Lupinus albus | Lalb_Chr21 | 6 | CH_lal_142 | 4 | 17 | 0.00000000515795 |
Lonicera japonica | GWHAAZE00000001 | 6 | CH_lonja_438 | 3 | 3 | 0.000000107598 |
Lonicera japonica | GWHAAZE00000002 | 6 | CH_lonja_486 | 3 | 4 | 0.000000430351 |
Magnolia biondii | Chr19 | 6 | CH_mbi_1060 | 3 | 32 | 0.000350175 |
Olea europaea | chr19 | 6 | CH_oeu_600 | 2 | 3 | 0.000480389 |
Oryza sativa ssp. japonica | chr01 | 6 | CH_osa_567 | 2 | 3 | 0.000158433 |
Sapria himalayana | scaffold29_7503565 | 6 | CH_shi_14 | 6 | 12 | 1.27099e-17 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |