Functional clusters
Information
- Type InterPro
- Description Protein ENHANCED DISEASE RESISTANCE 2-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-11 | 5 | CH_aar_19 | 9 | 13 | 2.43489e-23 |
| Actinidia chinensis | Lachesis_group14 | 5 | CH_ach_98 | 4 | 8 | 0.0000000800208 |
| Arabidopsis thaliana | Chr5 | 5 | CH_ath_336 | 3 | 9 | 0.0000124036 |
| Cicer arietinum L. | Ca_LG1_v3 | 5 | CH_car_322 | 3 | 14 | 0.000395844 |
| Carica papaya | supercontig_46 | 5 | CH_cpa_70 | 4 | 5 | 0.000000000902072 |
| Chlamydomonas reinhardtii | chromosome_17 | 5 | CH_cre_171 | 2 | 2 | 0.0003412 |
| Erythranthe guttata | scaffold_1 | 5 | CH_egut_563 | 3 | 11 | 0.000216086 |
| Lupinus albus | Lalb_Chr13 | 5 | CH_lal_295 | 3 | 3 | 0.00000280957 |
| Malus domestica | Chr07 | 5 | CH_mdo_568 | 3 | 3 | 0.000000785171 |
| Rhododendron simsii | chr09 | 5 | CH_rsi_588 | 3 | 7 | 0.0000183517 |
| Sequoiadendron giganteum | chr11 | 5 | CH_sgi_1171 | 3 | 3 | 0.000000299026 |
| Sapria himalayana | scaffold5_19632047 | 5 | CH_shi_212 | 3 | 3 | 0.00000274654 |
| Sapria himalayana | scaffold44_4510576 | 5 | CH_shi_244 | 3 | 6 | 0.0000548802 |
| Sapria himalayana | scaffold22_8815566 | 5 | CH_shi_556 | 3 | 12 | 0.00060257 |
| Vaccinium macrocarpon | chr7_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_737 | 2 | 2 | 0.000557543 |
| Vitis vinifera | chr2 | 5 | CH_vvi_466 | 3 | 7 | 0.0000364159 |
| Aethionema arabicum | LG-11 | 6 | CH_aar_19 | 9 | 13 | 2.43489e-23 |
| Actinidia chinensis | Lachesis_group14 | 6 | CH_ach_98 | 4 | 8 | 0.0000000800208 |
| Arabidopsis thaliana | Chr5 | 6 | CH_ath_336 | 3 | 9 | 0.0000124036 |
| Cicer arietinum L. | Ca_LG1_v3 | 6 | CH_car_322 | 3 | 14 | 0.000395844 |
| Carica papaya | supercontig_46 | 6 | CH_cpa_70 | 4 | 5 | 0.000000000902072 |
| Chlamydomonas reinhardtii | chromosome_17 | 6 | CH_cre_171 | 2 | 2 | 0.0003412 |
| Erythranthe guttata | scaffold_1 | 6 | CH_egut_563 | 3 | 11 | 0.000216086 |
| Lupinus albus | Lalb_Chr13 | 6 | CH_lal_295 | 3 | 3 | 0.00000280957 |
| Malus domestica | Chr07 | 6 | CH_mdo_568 | 3 | 3 | 0.000000785171 |
| Rhododendron simsii | chr09 | 6 | CH_rsi_588 | 3 | 7 | 0.0000183517 |
| Sequoiadendron giganteum | chr11 | 6 | CH_sgi_1171 | 3 | 3 | 0.000000299026 |
| Sapria himalayana | scaffold5_19632047 | 6 | CH_shi_212 | 3 | 3 | 0.00000274654 |
| Sapria himalayana | scaffold44_4510576 | 6 | CH_shi_244 | 3 | 6 | 0.0000548802 |
| Sapria himalayana | scaffold22_8815566 | 6 | CH_shi_556 | 3 | 12 | 0.00060257 |
| Vaccinium macrocarpon | chr7_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_737 | 2 | 2 | 0.000557543 |
| Vitis vinifera | chr2 | 6 | CH_vvi_466 | 3 | 7 | 0.0000364159 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |