Functional clusters
Information
- Type InterPro
- Description Peptidase M3A/M3B
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr3 | 5 | CH_acertr_131 | 5 | 17 | 0.000000000144198 |
| Actinidia chinensis | Lachesis_group25 | 5 | CH_ach_171 | 3 | 4 | 0.00000148702 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_7 | 5 | CH_amhyb_269 | 3 | 16 | 0.000118829 |
| Amborella trichopoda | AmTr_v1.0_scaffold00046 | 5 | CH_atr_280 | 3 | 7 | 0.000003312 |
| Capsicum annuum | PGAv.1.6.scaffold1061 | 5 | CH_can_70 | 6 | 6 | 2.42491e-18 |
| Malus domestica | Chr16 | 5 | CH_mdo_1437 | 2 | 2 | 0.000796344 |
| Nicotiana tabacum | Nitab4.5_0000139 | 5 | CH_nta_80 | 3 | 3 | 0.0000000722445 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 5 | CH_rch_599 | 3 | 4 | 0.0000001907 |
| Rhododendron simsii | chr10 | 5 | CH_rsi_905 | 2 | 2 | 0.000387184 |
| Salvia bowleyana | GWHASIU00000008 | 5 | CH_sbo_364 | 3 | 5 | 0.00000173852 |
| Sequoiadendron giganteum | chr10 | 5 | CH_sgi_1233 | 3 | 3 | 0.000000587373 |
| Sequoiadendron giganteum | chr10 | 5 | CH_sgi_1351 | 3 | 4 | 0.00000234909 |
| Sequoiadendron giganteum | chr6 | 5 | CH_sgi_402 | 5 | 6 | 0.000000000000117087 |
| Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_826 | 2 | 2 | 0.000929238 |
| Vigna mungo | CM024079.1 | 5 | CH_vmu_157 | 3 | 3 | 0.0000000626267 |
| Acer truncatum | chr3 | 6 | CH_acertr_131 | 5 | 17 | 0.000000000144198 |
| Actinidia chinensis | Lachesis_group25 | 6 | CH_ach_171 | 3 | 4 | 0.00000148702 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_7 | 6 | CH_amhyb_269 | 3 | 16 | 0.000118829 |
| Amborella trichopoda | AmTr_v1.0_scaffold00046 | 6 | CH_atr_280 | 3 | 7 | 0.000003312 |
| Capsicum annuum | PGAv.1.6.scaffold1061 | 6 | CH_can_70 | 6 | 6 | 2.42491e-18 |
| Malus domestica | Chr16 | 6 | CH_mdo_1437 | 2 | 2 | 0.000796344 |
| Nicotiana tabacum | Nitab4.5_0000139 | 6 | CH_nta_80 | 3 | 3 | 0.0000000722445 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 6 | CH_rch_599 | 3 | 4 | 0.0000001907 |
| Rhododendron simsii | chr10 | 6 | CH_rsi_905 | 2 | 2 | 0.000387184 |
| Salvia bowleyana | GWHASIU00000008 | 6 | CH_sbo_364 | 3 | 5 | 0.00000173852 |
| Sequoiadendron giganteum | chr10 | 6 | CH_sgi_1233 | 3 | 3 | 0.000000587373 |
| Sequoiadendron giganteum | chr10 | 6 | CH_sgi_1351 | 3 | 4 | 0.00000234909 |
| Sequoiadendron giganteum | chr6 | 6 | CH_sgi_402 | 5 | 6 | 0.000000000000117087 |
| Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_826 | 2 | 2 | 0.000929238 |
| Vigna mungo | CM024079.1 | 6 | CH_vmu_157 | 3 | 3 | 0.0000000626267 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |