Functional clusters
Information
- Type InterPro
- Description Reticulon-like protein, plant
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aquilegia oxysepala | CHR05 | 5 | CH_aox_213 | 3 | 3 | 0.0000021226 |
| Brassica carinata | ChrB06 | 5 | CH_bca_1627 | 3 | 6 | 0.000268378 |
| Brassica carinata | ChrC03 | 5 | CH_bca_540 | 4 | 6 | 0.000000101152 |
| Brassica napus | A02 | 5 | CH_bna_996 | 3 | 4 | 0.0000572819 |
| Brassica napus | C02 | 5 | CH_bna_997 | 3 | 4 | 0.0000572819 |
| Brassica oleracea | C2 | 5 | CH_bol_495 | 3 | 4 | 0.0000234158 |
| Brassica rapa | A02 | 5 | CH_bra_370 | 3 | 5 | 0.0000904951 |
| Chara braunii | BFEA01000572 | 5 | CH_cbr_80 | 3 | 3 | 0.000000077605 |
| Carica papaya | supercontig_11 | 5 | CH_cpa_197 | 3 | 3 | 0.00000162684 |
| Theobroma cacao | Chromosome_3 | 5 | CH_tca_482 | 3 | 5 | 0.0000292681 |
| Aquilegia oxysepala | CHR05 | 6 | CH_aox_213 | 3 | 3 | 0.0000021226 |
| Brassica carinata | ChrB06 | 6 | CH_bca_1627 | 3 | 6 | 0.000268378 |
| Brassica carinata | ChrC03 | 6 | CH_bca_540 | 4 | 6 | 0.000000101152 |
| Brassica napus | A02 | 6 | CH_bna_996 | 3 | 4 | 0.0000572819 |
| Brassica napus | C02 | 6 | CH_bna_997 | 3 | 4 | 0.0000572819 |
| Brassica oleracea | C2 | 6 | CH_bol_495 | 3 | 4 | 0.0000234158 |
| Brassica rapa | A02 | 6 | CH_bra_370 | 3 | 5 | 0.0000904951 |
| Chara braunii | BFEA01000572 | 6 | CH_cbr_80 | 3 | 3 | 0.000000077605 |
| Carica papaya | supercontig_11 | 6 | CH_cpa_197 | 3 | 3 | 0.00000162684 |
| Theobroma cacao | Chromosome_3 | 6 | CH_tca_482 | 3 | 5 | 0.0000292681 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |