Functional clusters

Information

  • Type InterPro
  • Description Tropinone reductase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-1 5 CH_aar_131 4 10 0.000000033454
Acer truncatum chr8 5 CH_acertr_27 6 6 1.09735e-18
Arabidopsis lyrata scaffold_4 5 CH_aly_8 12 21 1.29661e-32
Aquilegia oxysepala CHR03 5 CH_aox_6 7 7 2.51596e-21
Arabidopsis thaliana Chr2 5 CH_ath_8 12 37 8.40777e-33
Amborella trichopoda AmTr_v1.0_scaffold00012 5 CH_atr_24 8 9 2.54908e-24
Brassica carinata ChrC02 5 CH_bca_150 6 17 0.00000000000201153
Brassica carinata ChrB01 5 CH_bca_318 4 4 0.00000000153441
Brassica carinata ChrB06 5 CH_bca_83 7 19 0.00000000000000253804
Brassica carinata ChrC01 5 CH_bca_948 3 3 0.00000448617
Brassica napus C04 5 CH_bna_127 7 23 0.000000000000235835
Brassica napus C04 5 CH_bna_25 10 26 5.10559e-22
Brassica napus A03 5 CH_bna_347 4 4 0.00000000814003
Brassica napus A05 5 CH_bna_78 7 12 7.65443e-16
Brassica napus C03 5 CH_bna_847 3 3 0.0000159466
Brassica napus A04 5 CH_bna_88 7 14 0.00000000000000331411
Brassica oleracea C3 5 CH_bol_152 4 4 0.00000000248837
Brassica oleracea C4 5 CH_bol_53 7 22 0.0000000000000254426
Brassica oleracea C4 5 CH_bol_78 6 16 0.00000000000119444
Brassica rapa A04 5 CH_bra_14 7 10 1.00846e-17
Brassica rapa A05 5 CH_bra_81 5 11 0.000000000309404
Beta vulgaris Chr7_EL10_PGA_scaffold5 5 CH_bvu_521 2 2 0.000827917
Camellia sinensis var. sinensis Chr4 5 CH_camsi_45 7 7 2.41668e-22
Cannabis sativa NC_044375.1 5 CH_cansat_171 4 9 0.0000000224557
Cannabis sativa NC_044378.1 5 CH_cansat_328 3 6 0.0000155134
Capsicum annuum PGAv.1.6.scaffold771 5 CH_can_154 5 6 0.00000000000915295
Capsicum annuum PGAv.1.6.scaffold229 5 CH_can_477 3 4 0.0000229211
Cicer arietinum L. Ca_LG3_v3 5 CH_car_147 3 8 0.0000101706
Corylus avellana 6 5 CH_cav_324 4 19 0.00000258332
Corylus avellana 7 5 CH_cav_376 3 4 0.00000775723
Coffea canephora chr4 5 CH_ccan_1 10 52 4.11545e-29
Citrus clementina scaffold_6 5 CH_ccl_25 10 12 7.27321e-27
Citrus clementina scaffold_8 5 CH_ccl_71 7 7 1.20981e-18
Carpinus fangiana Cfa04 5 CH_cfa_9 12 14 5.0498e-34
Cardamine hirsuta Chr4 5 CH_chi_3 15 23 7.27022e-39
Cardamine hirsuta Chr1 5 CH_chi_460 3 4 0.0000658938
Cardamine hirsuta Chr4 5 CH_chi_461 3 4 0.0000658938
Cardamine hirsuta Chr4 5 CH_chi_569 3 5 0.000164635
Carya illinoinensis Chr13 5 CH_cil_106 5 5 0.00000000000000620034
Corchorus olitorius AWUE01016479.1 5 CH_col_199 2 2 0.000876296
Carica papaya supercontig_81 5 CH_cpa_118 3 3 0.0000000542279
Chenopodium quinoa C_Quinoa_Scaffold_1373 5 CH_cqu_184 4 4 0.000000000228193
Chenopodium quinoa C_Quinoa_Scaffold_1529 5 CH_cqu_614 3 7 0.0000336833
Capsella rubella scaffold_4 5 CH_cru_3 19 26 1.93516e-52
Cucumis sativus L. chr3 5 CH_csa_442 2 2 0.000500856
Daucus carota DCARv2_Chr8 5 CH_dca_302 3 4 0.00000402613
Davidia involucrata GWHABJS00000007 5 CH_din_169 4 5 0.000000001878
Davidia involucrata GWHABJS00000021 5 CH_din_32 7 7 4.2309e-21
Durio zibethinus NW_019168159.1 5 CH_dzi_128 4 7 0.00000000131691
Erigeron canadensis Conyza_canadensis_scaffold:2 5 CH_eca_245 3 3 0.0000000604069
Erigeron canadensis Conyza_canadensis_scaffold:8 5 CH_eca_806 2 2 0.000673083
Eucalyptus grandis Chr10 5 CH_egr_56 11 13 6.26988e-33
Eutrema salsugineum scaffold_9 5 CH_esa_257 3 3 0.00000842888
Eutrema salsugineum scaffold_10 5 CH_esa_5 12 25 3.05511e-29
Fragaria vesca Fvb3 5 CH_fve_133 5 9 0.0000000000146371
Fragaria vesca Fvb6 5 CH_fve_243 4 6 0.00000000657533
Gossypium hirsutum A13 5 CH_ghi_102 7 8 1.09755e-19
Gossypium hirsutum D13 5 CH_ghi_149 6 8 0.00000000000000151391
Gossypium hirsutum D05 5 CH_ghi_321 4 4 0.000000000722502
Glycine max Gm12 5 CH_gma_101 5 5 0.000000000000316783
Glycine max Gm11 5 CH_gma_201 5 14 0.000000000632649
Glycine max Gm07 5 CH_gma_240 4 5 0.00000000490785
Glycine max Gm18 5 CH_gma_578 3 6 0.000057435
Glycine max Gm18 5 CH_gma_848 3 11 0.000473187
Gossypium raimondii Chr13 5 CH_gra_43 7 7 1.48135e-21
Helianthus annuus HanXRQChr15 5 CH_han_311 4 6 0.00000000185615
Helianthus annuus HanXRQChr08 5 CH_han_943 3 12 0.000140729
Lotus japonicus chr3 5 CH_lja_516 2 2 0.000429046
Lonicera japonica GWHAAZE00000003 5 CH_lonja_451 3 3 0.000000188297
Lactuca sativa Lsat_1_v8_lg_9 5 CH_lsa_14 13 26 1.0931e-33
Magnolia biondii Chr02 5 CH_mbi_72 7 18 1.59016e-17
Malus domestica Chr12 5 CH_mdo_174 5 7 0.00000000000662466
Malus domestica Chr04 5 CH_mdo_407 4 7 0.0000000342423
Malus domestica Chr11 5 CH_mdo_62 7 10 3.26605e-18
Manihot esculenta Chromosome08 5 CH_mes_404 3 4 0.00000492087
Manihot esculenta Chromosome10 5 CH_mes_405 3 4 0.00000492087
Medicago truncatula chr7 5 CH_mtr_181 6 11 0.00000000000000608717
Medicago truncatula chr3 5 CH_mtr_224 6 18 0.000000000000244287
Nelumbo nucifera chr2 5 CH_nnu_148 3 3 0.0000000139215
Olea europaea chr13 5 CH_oeu_605 2 2 0.000533789
Oryza sativa ssp. japonica chr03 5 CH_osa_316 3 3 0.00000119657
Oryza sativa ssp. japonica chr11 5 CH_osa_320 4 19 0.00000122078
Petunia axillaris Peaxi162Scf00109 5 CH_pax_327 3 5 0.00000890625
Punica granatum NC_045132.1 5 CH_pgr_319 3 5 0.00000472798
Prunus persica Pp06 5 CH_ppe_46 8 12 1.80466e-23
Pisum sativum chr3LG5 5 CH_psa_102 5 18 0.0000000000598697
Papaver somniferum NC_039358.1 5 CH_pso_145 5 5 0.0000000000000224694
Phaseolus vulgaris Chr08 5 CH_pvu_15 12 13 5.16917e-35
Phaseolus vulgaris Chr01 5 CH_pvu_170 5 12 0.00000000200667
Quercus lobata 10 5 CH_qlo_453 5 5 0.0000000000126492
Quercus lobata 7 5 CH_qlo_506 7 39 0.0000000000961083
Quercus lobata 1 5 CH_qlo_88 14 77 1.31736e-25
Rosa chinensis RcHm_v2.0_Chr4 5 CH_rch_152 8 29 3.35733e-16
Rosa chinensis RcHm_v2.0_Chr3 5 CH_rch_204 6 9 0.0000000000000437735
Simmondsia chinensis GWHAASQ00000001 5 CH_sci_154 3 4 0.000000434928
Sechium edule LG04 5 CH_sed_494 2 2 0.000713419
Solanum lycopersicum SL4.0ch03 5 CH_sly_384 3 3 0.00000113688
Schrenkiella parvula ch4-6 5 CH_spa_10 7 14 7.72279e-18
Solanum pennellii Spenn-ch03 5 CH_spe_522 3 8 0.0000365299
Selenicereus undatus Scaffold_33678 5 CH_sun_131 4 57 0.00000678652
Trochodendron aralioides group7 5 CH_tar_194 3 3 0.000000021627
Theobroma cacao Chromosome_9 5 CH_tca_12 10 10 2.83969e-32
Tarenaya hassleriana NW_010965696.1 5 CH_tha_24 6 8 0.0000000000000567967
Tarenaya hassleriana NW_010969548.1 5 CH_tha_9 8 9 4.68015e-21
Trifolium pratense Tp57577_TGAC_v2_LG3 5 CH_tpr_166 4 10 0.00000000955795
Tripterygium wilfordii NC_052238.1 5 CH_twi_104 4 4 0.000000000371719
Tripterygium wilfordii NC_052233.1 5 CH_twi_31 6 7 1.45574e-16
Vaccinium macrocarpon chr2_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_561 2 2 0.000278772
Vigna mungo CM024070.1 5 CH_vmu_165 4 8 0.000000102972
Vigna mungo CM024070.1 5 CH_vmu_189 4 10 0.000000308705
Vigna mungo CM024076.1 5 CH_vmu_31 6 6 2.02994e-16
Vanilla planifolia CM028154.1 5 CH_vpl_109 3 4 0.0000000327566
Vitis vinifera chr8 5 CH_vvi_230 4 4 0.0000000140301
Vitis vinifera chr13 5 CH_vvi_268 4 5 0.0000000701051
Vitis vinifera chr6 5 CH_vvi_7 16 20 3.7653e-44
Zea mays 4 5 CH_zma_511 2 2 0.000766969
Aethionema arabicum LG-1 6 CH_aar_131 4 10 0.000000033454
Acer truncatum chr8 6 CH_acertr_27 6 6 1.09735e-18
Arabidopsis lyrata scaffold_4 6 CH_aly_8 12 21 1.29661e-32
Aquilegia oxysepala CHR03 6 CH_aox_6 7 7 2.51596e-21
Arabidopsis thaliana Chr2 6 CH_ath_8 12 37 8.40777e-33
Amborella trichopoda AmTr_v1.0_scaffold00012 6 CH_atr_24 8 9 2.54908e-24
Brassica carinata ChrC02 6 CH_bca_150 6 17 0.00000000000201153
Brassica carinata ChrB01 6 CH_bca_318 4 4 0.00000000153441
Brassica carinata ChrB06 6 CH_bca_83 7 19 0.00000000000000253804
Brassica carinata ChrC01 6 CH_bca_948 3 3 0.00000448617
Brassica napus C04 6 CH_bna_127 7 23 0.000000000000235835
Brassica napus C04 6 CH_bna_25 10 26 5.10559e-22
Brassica napus A03 6 CH_bna_347 4 4 0.00000000814003
Brassica napus A05 6 CH_bna_78 7 12 7.65443e-16
Brassica napus C03 6 CH_bna_847 3 3 0.0000159466
Brassica napus A04 6 CH_bna_88 7 14 0.00000000000000331411
Brassica oleracea C3 6 CH_bol_152 4 4 0.00000000248837
Brassica oleracea C4 6 CH_bol_53 7 22 0.0000000000000254426
Brassica oleracea C4 6 CH_bol_78 6 16 0.00000000000119444
Brassica rapa A04 6 CH_bra_14 7 10 1.00846e-17
Brassica rapa A05 6 CH_bra_81 5 11 0.000000000309404
Beta vulgaris Chr7_EL10_PGA_scaffold5 6 CH_bvu_521 2 2 0.000827917
Camellia sinensis var. sinensis Chr4 6 CH_camsi_45 7 7 2.41668e-22
Cannabis sativa NC_044375.1 6 CH_cansat_171 4 9 0.0000000224557
Cannabis sativa NC_044378.1 6 CH_cansat_328 3 6 0.0000155134
Capsicum annuum PGAv.1.6.scaffold771 6 CH_can_154 5 6 0.00000000000915295
Capsicum annuum PGAv.1.6.scaffold229 6 CH_can_477 3 4 0.0000229211
Cicer arietinum L. Ca_LG3_v3 6 CH_car_147 3 8 0.0000101706
Corylus avellana 6 6 CH_cav_324 4 19 0.00000258332
Corylus avellana 7 6 CH_cav_376 3 4 0.00000775723
Coffea canephora chr4 6 CH_ccan_1 10 52 4.11545e-29
Citrus clementina scaffold_6 6 CH_ccl_25 10 12 7.27321e-27
Citrus clementina scaffold_8 6 CH_ccl_71 7 7 1.20981e-18
Carpinus fangiana Cfa04 6 CH_cfa_9 12 14 5.0498e-34
Cardamine hirsuta Chr4 6 CH_chi_3 15 23 7.27022e-39
Cardamine hirsuta Chr1 6 CH_chi_460 3 4 0.0000658938
Cardamine hirsuta Chr4 6 CH_chi_461 3 4 0.0000658938
Cardamine hirsuta Chr4 6 CH_chi_569 3 5 0.000164635
Carya illinoinensis Chr13 6 CH_cil_106 5 5 0.00000000000000620034
Corchorus olitorius AWUE01016479.1 6 CH_col_199 2 2 0.000876296
Carica papaya supercontig_81 6 CH_cpa_118 3 3 0.0000000542279
Chenopodium quinoa C_Quinoa_Scaffold_1373 6 CH_cqu_184 4 4 0.000000000228193
Chenopodium quinoa C_Quinoa_Scaffold_1529 6 CH_cqu_614 3 7 0.0000336833
Capsella rubella scaffold_4 6 CH_cru_3 19 26 1.93516e-52
Cucumis sativus L. chr3 6 CH_csa_442 2 2 0.000500856
Daucus carota DCARv2_Chr8 6 CH_dca_302 3 4 0.00000402613
Davidia involucrata GWHABJS00000007 6 CH_din_169 4 5 0.000000001878
Davidia involucrata GWHABJS00000021 6 CH_din_32 7 7 4.2309e-21
Durio zibethinus NW_019168159.1 6 CH_dzi_128 4 7 0.00000000131691
Erigeron canadensis Conyza_canadensis_scaffold:2 6 CH_eca_245 3 3 0.0000000604069
Erigeron canadensis Conyza_canadensis_scaffold:8 6 CH_eca_806 2 2 0.000673083
Eucalyptus grandis Chr10 6 CH_egr_56 11 13 6.26988e-33
Eutrema salsugineum scaffold_9 6 CH_esa_257 3 3 0.00000842888
Eutrema salsugineum scaffold_10 6 CH_esa_5 12 25 3.05511e-29
Fragaria x ananassa Fvb6-4 6 CH_fan_216 4 5 0.00000000166752
Fragaria x ananassa Fvb6-2 6 CH_fan_239 4 6 0.00000000500167
Fragaria x ananassa Fvb6-1 6 CH_fan_462 3 3 0.00000150222
Fragaria x ananassa Fvb3-3 6 CH_fan_655 3 5 0.0000150169
Fragaria vesca Fvb3 6 CH_fve_133 5 9 0.0000000000146371
Fragaria vesca Fvb6 6 CH_fve_243 4 6 0.00000000657533
Gossypium hirsutum A13 6 CH_ghi_102 7 8 1.09755e-19
Gossypium hirsutum D13 6 CH_ghi_149 6 8 0.00000000000000151391
Gossypium hirsutum D05 6 CH_ghi_321 4 4 0.000000000722502
Glycine max Gm12 6 CH_gma_101 5 5 0.000000000000316783
Glycine max Gm11 6 CH_gma_201 5 14 0.000000000632649
Glycine max Gm07 6 CH_gma_240 4 5 0.00000000490785
Glycine max Gm18 6 CH_gma_578 3 6 0.000057435
Glycine max Gm18 6 CH_gma_848 3 11 0.000473187
Gossypium raimondii Chr13 6 CH_gra_43 7 7 1.48135e-21
Helianthus annuus HanXRQChr15 6 CH_han_311 4 6 0.00000000185615
Helianthus annuus HanXRQChr08 6 CH_han_943 3 12 0.000140729
Lotus japonicus chr3 6 CH_lja_516 2 2 0.000429046
Lonicera japonica GWHAAZE00000003 6 CH_lonja_451 3 3 0.000000188297
Lactuca sativa Lsat_1_v8_lg_9 6 CH_lsa_14 13 26 1.0931e-33
Magnolia biondii Chr02 6 CH_mbi_72 7 18 1.59016e-17
Malus domestica Chr12 6 CH_mdo_174 5 7 0.00000000000662466
Malus domestica Chr04 6 CH_mdo_407 4 7 0.0000000342423
Malus domestica Chr11 6 CH_mdo_62 7 10 3.26605e-18
Manihot esculenta Chromosome08 6 CH_mes_404 3 4 0.00000492087
Manihot esculenta Chromosome10 6 CH_mes_405 3 4 0.00000492087
Medicago truncatula chr7 6 CH_mtr_181 6 11 0.00000000000000608717
Medicago truncatula chr3 6 CH_mtr_224 6 18 0.000000000000244287
Nelumbo nucifera chr2 6 CH_nnu_148 3 3 0.0000000139215
Olea europaea chr13 6 CH_oeu_605 2 2 0.000533789
Oryza sativa ssp. japonica chr03 6 CH_osa_316 3 3 0.00000119657
Oryza sativa ssp. japonica chr11 6 CH_osa_320 4 19 0.00000122078
Petunia axillaris Peaxi162Scf00109 6 CH_pax_327 3 5 0.00000890625
Punica granatum NC_045132.1 6 CH_pgr_319 3 5 0.00000472798
Prunus persica Pp06 6 CH_ppe_46 8 12 1.80466e-23
Pisum sativum chr3LG5 6 CH_psa_102 5 18 0.0000000000598697
Papaver somniferum NC_039358.1 6 CH_pso_145 5 5 0.0000000000000224694
Phaseolus vulgaris Chr08 6 CH_pvu_15 12 13 5.16917e-35
Phaseolus vulgaris Chr01 6 CH_pvu_170 5 12 0.00000000200667
Quercus lobata 10 6 CH_qlo_453 5 5 0.0000000000126492
Quercus lobata 7 6 CH_qlo_506 7 39 0.0000000000961083
Quercus lobata 1 6 CH_qlo_88 14 77 1.31736e-25
Rosa chinensis RcHm_v2.0_Chr4 6 CH_rch_152 8 29 3.35733e-16
Rosa chinensis RcHm_v2.0_Chr3 6 CH_rch_204 6 9 0.0000000000000437735
Simmondsia chinensis GWHAASQ00000001 6 CH_sci_154 3 4 0.000000434928
Sechium edule LG04 6 CH_sed_494 2 2 0.000713419
Solanum lycopersicum SL4.0ch03 6 CH_sly_384 3 3 0.00000113688
Schrenkiella parvula ch4-6 6 CH_spa_10 7 14 7.72279e-18
Solanum pennellii Spenn-ch03 6 CH_spe_522 3 8 0.0000365299
Selenicereus undatus Scaffold_33678 6 CH_sun_131 4 57 0.00000678652
Trochodendron aralioides group7 6 CH_tar_194 3 3 0.000000021627
Theobroma cacao Chromosome_9 6 CH_tca_12 10 10 2.83969e-32
Tarenaya hassleriana NW_010965696.1 6 CH_tha_24 6 8 0.0000000000000567967
Tarenaya hassleriana NW_010969548.1 6 CH_tha_9 8 9 4.68015e-21
Trifolium pratense Tp57577_TGAC_v2_LG3 6 CH_tpr_166 4 10 0.00000000955795
Tripterygium wilfordii NC_052238.1 6 CH_twi_104 4 4 0.000000000371719
Tripterygium wilfordii NC_052233.1 6 CH_twi_31 6 7 1.45574e-16
Vaccinium macrocarpon chr2_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_561 2 2 0.000278772
Vigna mungo CM024070.1 6 CH_vmu_165 4 8 0.000000102972
Vigna mungo CM024070.1 6 CH_vmu_189 4 10 0.000000308705
Vigna mungo CM024076.1 6 CH_vmu_31 6 6 2.02994e-16
Vanilla planifolia CM028154.1 6 CH_vpl_109 3 4 0.0000000327566
Vitis vinifera chr8 6 CH_vvi_230 4 4 0.0000000140301
Vitis vinifera chr13 6 CH_vvi_268 4 5 0.0000000701051
Vitis vinifera chr6 6 CH_vvi_7 16 20 3.7653e-44
Zea mays 4 6 CH_zma_511 2 2 0.000766969

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001