Functional clusters

Information

  • Type InterPro
  • Description FIPS3/FIPS5-like

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr4 5 CH_acertr_245 3 3 0.00000002982
Actinidia chinensis Lachesis_group15 5 CH_ach_635 2 2 0.000814819
Camellia sinensis var. sinensis Chr6 5 CH_camsi_138 5 9 0.0000000000000250672
Chara braunii BFEA01000633 5 CH_cbr_207 2 2 0.0000719269
Ceratophyllum demersum 1 5 CH_cde_464 2 2 0.000473878
Carpinus fangiana Cfa01 5 CH_cfa_619 2 2 0.000757346
Lotus japonicus chr4 5 CH_lja_549 2 2 0.000429046
Oryza sativa ssp. japonica chr03 5 CH_osa_665 2 2 0.000316874
Oryza sativa ssp. japonica chr03 5 CH_osa_666 2 2 0.000316874
Sapria himalayana scaffold5_19632047 5 CH_shi_19 5 5 4.81146e-16
Selenicereus undatus Scaffold_33679 5 CH_sun_216 2 2 0.0000726639
Vanilla planifolia CM028159.1 5 CH_vpl_729 2 2 0.00073888
Acer truncatum chr4 6 CH_acertr_245 3 3 0.00000002982
Actinidia chinensis Lachesis_group15 6 CH_ach_635 2 2 0.000814819
Camellia sinensis var. sinensis Chr6 6 CH_camsi_138 5 9 0.0000000000000250672
Chara braunii BFEA01000633 6 CH_cbr_207 2 2 0.0000719269
Ceratophyllum demersum 1 6 CH_cde_464 2 2 0.000473878
Carpinus fangiana Cfa01 6 CH_cfa_619 2 2 0.000757346
Lotus japonicus chr4 6 CH_lja_549 2 2 0.000429046
Oryza sativa ssp. japonica chr03 6 CH_osa_665 2 2 0.000316874
Oryza sativa ssp. japonica chr03 6 CH_osa_666 2 2 0.000316874
Sapria himalayana scaffold5_19632047 6 CH_shi_19 5 5 4.81146e-16
Selenicereus undatus Scaffold_33679 6 CH_sun_216 2 2 0.0000726639
Vanilla planifolia CM028159.1 6 CH_vpl_729 2 2 0.00073888

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001