Functional clusters

Information

  • Type InterPro
  • Description Protein PUTATIVE RECOMBINATION INITIATION DEFECT 1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr3 5 CH_acertr_647 2 2 0.000070497
Amaranthus hybridus AmaHy_arrow1_Scaffold_4 5 CH_amhyb_257 2 2 0.0000841751
Brassica carinata ChrB01 5 CH_bca_1724 2 4 0.000384762
Cardamine hirsuta Chr7 5 CH_chi_531 2 2 0.0000691204
Davidia involucrata GWHABJS00000016 5 CH_din_475 2 2 0.0000500125
Lupinus albus Lalb_Chr24 5 CH_lal_423 2 2 0.0000524824
Lonicera japonica GWHAAZE00000003 5 CH_lonja_641 3 17 0.0000146226
Pisum sativum chr2LG1 5 CH_psa_474 2 2 0.0000521635
Rosa chinensis RcHm_v2.0_Chr4 5 CH_rch_1459 2 7 0.000837087
Salvia bowleyana GWHASIU00000001 5 CH_sbo_635 2 4 0.000272975
Sapria himalayana scaffold1_25991295 5 CH_shi_146 3 6 0.0000000980824
Tripterygium wilfordii NC_052242.1 5 CH_twi_355 2 2 0.0000557507
Utricularia gibba unitig_748 5 CH_ugi_213 2 2 0.0000820479
Vaccinium macrocarpon chr4_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_509 2 2 0.0000929238
Vanilla planifolia CM028162.1 5 CH_vpl_446 2 2 0.000073888
Acer truncatum chr3 6 CH_acertr_647 2 2 0.000070497
Amaranthus hybridus AmaHy_arrow1_Scaffold_4 6 CH_amhyb_257 2 2 0.0000841751
Brassica carinata ChrB01 6 CH_bca_1724 2 4 0.000384762
Cardamine hirsuta Chr7 6 CH_chi_531 2 2 0.0000691204
Davidia involucrata GWHABJS00000016 6 CH_din_475 2 2 0.0000500125
Lupinus albus Lalb_Chr24 6 CH_lal_423 2 2 0.0000524824
Lonicera japonica GWHAAZE00000003 6 CH_lonja_641 3 17 0.0000146226
Pisum sativum chr2LG1 6 CH_psa_474 2 2 0.0000521635
Rosa chinensis RcHm_v2.0_Chr4 6 CH_rch_1459 2 7 0.000837087
Salvia bowleyana GWHASIU00000001 6 CH_sbo_635 2 4 0.000272975
Sapria himalayana scaffold1_25991295 6 CH_shi_146 3 6 0.0000000980824
Tripterygium wilfordii NC_052242.1 6 CH_twi_355 2 2 0.0000557507
Utricularia gibba unitig_748 6 CH_ugi_213 2 2 0.0000820479
Vaccinium macrocarpon chr4_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_509 2 2 0.0000929238
Vanilla planifolia CM028162.1 6 CH_vpl_446 2 2 0.000073888

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001