Functional clusters
Information
- Type InterPro
- Description Inactive poly [ADP-ribose] polymerase RCD1/SRO1-5
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica carinata | ChrB07 | 5 | CH_bca_861 | 3 | 3 | 0.00000224548 |
| Camellia sinensis var. sinensis | Chr14 | 5 | CH_camsi_589 | 3 | 3 | 0.000000520419 |
| Cardamine hirsuta | Chr4 | 5 | CH_chi_305 | 3 | 3 | 0.000000401335 |
| Eucalyptus grandis | Chr02 | 5 | CH_egr_869 | 3 | 6 | 0.00000205475 |
| Lotus japonicus | chr4 | 5 | CH_lja_294 | 3 | 3 | 0.00000279199 |
| Lotus japonicus | chr2 | 5 | CH_lja_295 | 3 | 3 | 0.00000279199 |
| Magnolia biondii | Chr16 | 5 | CH_mbi_469 | 3 | 3 | 0.00000042457 |
| Populus trichocarpa | Chr06 | 5 | CH_ptr_456 | 3 | 5 | 0.00000601154 |
| Phaseolus vulgaris | Chr02 | 5 | CH_pvu_697 | 2 | 2 | 0.000734727 |
| Rhododendron simsii | chr12 | 5 | CH_rsi_279 | 4 | 4 | 0.000000000576459 |
| Solanum lycopersicum | SL4.0ch05 | 5 | CH_sly_972 | 2 | 2 | 0.000880411 |
| Tripterygium wilfordii | NC_052243.1 | 5 | CH_twi_191 | 3 | 3 | 0.000000261091 |
| Vigna mungo | CM024074.1 | 5 | CH_vmu_606 | 2 | 2 | 0.000646141 |
| Vitis vinifera | chr2 | 5 | CH_vvi_791 | 2 | 2 | 0.00076063 |
| Brassica carinata | ChrB07 | 6 | CH_bca_861 | 3 | 3 | 0.00000224548 |
| Camellia sinensis var. sinensis | Chr14 | 6 | CH_camsi_589 | 3 | 3 | 0.000000520419 |
| Cardamine hirsuta | Chr4 | 6 | CH_chi_305 | 3 | 3 | 0.000000401335 |
| Eucalyptus grandis | Chr02 | 6 | CH_egr_869 | 3 | 6 | 0.00000205475 |
| Lotus japonicus | chr4 | 6 | CH_lja_294 | 3 | 3 | 0.00000279199 |
| Lotus japonicus | chr2 | 6 | CH_lja_295 | 3 | 3 | 0.00000279199 |
| Magnolia biondii | Chr16 | 6 | CH_mbi_469 | 3 | 3 | 0.00000042457 |
| Populus trichocarpa | Chr06 | 6 | CH_ptr_456 | 3 | 5 | 0.00000601154 |
| Phaseolus vulgaris | Chr02 | 6 | CH_pvu_697 | 2 | 2 | 0.000734727 |
| Rhododendron simsii | chr12 | 6 | CH_rsi_279 | 4 | 4 | 0.000000000576459 |
| Solanum lycopersicum | SL4.0ch05 | 6 | CH_sly_972 | 2 | 2 | 0.000880411 |
| Tripterygium wilfordii | NC_052243.1 | 6 | CH_twi_191 | 3 | 3 | 0.000000261091 |
| Vigna mungo | CM024074.1 | 6 | CH_vmu_606 | 2 | 2 | 0.000646141 |
| Vitis vinifera | chr2 | 6 | CH_vvi_791 | 2 | 2 | 0.00076063 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |