Functional clusters

Information

  • Type InterPro
  • Description Tetratricopeptide repeat protein POLLENLESS 3/SULFUR DEFICIENCY-INDUCED 1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Eucalyptus grandis Chr11 5 CH_egr_1420 2 2 0.000877912
Gossypium raimondii Chr07 5 CH_gra_681 2 2 0.00080416
Physcomitrium patens Chr24 5 CH_ppa_106 4 44 0.0000117331
Pisum sativum chr3LG5 5 CH_psa_592 3 35 0.000266587
Phaseolus vulgaris Chr08 5 CH_pvu_636 2 2 0.000440836
Quercus lobata 5 5 CH_qlo_666 4 10 0.0000000109166
Sequoiadendron giganteum chr1 5 CH_sgi_642 4 4 0.000000000072839
Solanum tuberosum ST4.03ch09 5 CH_stu_940 2 2 0.000768679
Trifolium pratense Tp57577_TGAC_v2_scaf_585 5 CH_tpr_715 2 2 0.000454184
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_821 2 2 0.000929238
Vitis vinifera chr7 5 CH_vvi_369 3 4 0.00000121483
Eucalyptus grandis Chr11 6 CH_egr_1420 2 2 0.000877912
Gossypium raimondii Chr07 6 CH_gra_681 2 2 0.00080416
Physcomitrium patens Chr24 6 CH_ppa_106 4 44 0.0000117331
Pisum sativum chr3LG5 6 CH_psa_592 3 35 0.000266587
Phaseolus vulgaris Chr08 6 CH_pvu_636 2 2 0.000440836
Quercus lobata 5 6 CH_qlo_666 4 10 0.0000000109166
Sequoiadendron giganteum chr1 6 CH_sgi_642 4 4 0.000000000072839
Solanum tuberosum ST4.03ch09 6 CH_stu_940 2 2 0.000768679
Trifolium pratense Tp57577_TGAC_v2_scaf_585 6 CH_tpr_715 2 2 0.000454184
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_821 2 2 0.000929238
Vitis vinifera chr7 6 CH_vvi_369 3 4 0.00000121483

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001