Functional clusters
Information
- Type InterPro
- Description Ribulose bisphosphate carboxylase/oxygenase activase-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr12 | 5 | CH_acertr_200 | 4 | 8 | 0.00000000926492 |
| Acer truncatum | chr8 | 5 | CH_acertr_515 | 3 | 9 | 0.0000525413 |
| Oryza sativa ssp. japonica | chr11 | 5 | CH_osa_664 | 2 | 2 | 0.000316874 |
| Quercus lobata | 5 | 5 | CH_qlo_1037 | 3 | 6 | 0.00000447658 |
| Theobroma cacao | Chromosome_6 | 5 | CH_tca_378 | 3 | 4 | 0.00000112629 |
| Vanilla planifolia | CM028158.1 | 5 | CH_vpl_564 | 2 | 2 | 0.000221664 |
| Acer truncatum | chr12 | 6 | CH_acertr_200 | 4 | 8 | 0.00000000926492 |
| Acer truncatum | chr8 | 6 | CH_acertr_515 | 3 | 9 | 0.0000525413 |
| Oryza sativa ssp. japonica | chr11 | 6 | CH_osa_664 | 2 | 2 | 0.000316874 |
| Quercus lobata | 5 | 6 | CH_qlo_1037 | 3 | 6 | 0.00000447658 |
| Theobroma cacao | Chromosome_6 | 6 | CH_tca_378 | 3 | 4 | 0.00000112629 |
| Vanilla planifolia | CM028158.1 | 6 | CH_vpl_564 | 2 | 2 | 0.000221664 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |