Functional clusters

Information

  • Type InterPro
  • Description Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 6/7

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cannabis sativa NC_044377.1 5 CH_cansat_538 2 2 0.000393985
Durio zibethinus NW_019167937.1 5 CH_dzi_649 2 2 0.000973326
Erigeron canadensis Conyza_canadensis_scaffold:8 5 CH_eca_774 2 2 0.000448722
Fragaria vesca Fvb5 5 CH_fve_434 3 11 0.00000343439
Glycine max Gm14 5 CH_gma_562 2 2 0.0000379557
Lonicera japonica GWHAAZE00000002 5 CH_lonja_417 3 3 0.0000000537991
Lactuca sativa Lsat_1_v8_lg_5 5 CH_lsa_720 2 2 0.000154202
Nelumbo nucifera chr5 5 CH_nnu_572 2 2 0.000481684
Oryza sativa ssp. japonica chr04 5 CH_osa_600 2 2 0.000158437
Pisum sativum chr6LG2 5 CH_psa_760 2 4 0.000938861
Quercus lobata 9 5 CH_qlo_862 3 4 0.000000319847
Solanum lycopersicum SL4.0ch03 5 CH_sly_833 2 2 0.000352164
Solanum tuberosum ST4.03ch04 5 CH_stu_938 2 2 0.000768679
Solanum tuberosum ST4.03ch06 5 CH_stu_939 2 2 0.000768679
Theobroma cacao Chromosome_8 5 CH_tca_700 2 2 0.000439432
Cannabis sativa NC_044377.1 6 CH_cansat_538 2 2 0.000393985
Durio zibethinus NW_019167937.1 6 CH_dzi_649 2 2 0.000973326
Erigeron canadensis Conyza_canadensis_scaffold:8 6 CH_eca_774 2 2 0.000448722
Fragaria x ananassa Fvb5-1 6 CH_fan_604 3 10 0.00000739256
Fragaria vesca Fvb5 6 CH_fve_434 3 11 0.00000343439
Glycine max Gm14 6 CH_gma_562 2 2 0.0000379557
Lonicera japonica GWHAAZE00000002 6 CH_lonja_417 3 3 0.0000000537991
Lactuca sativa Lsat_1_v8_lg_5 6 CH_lsa_720 2 2 0.000154202
Nelumbo nucifera chr5 6 CH_nnu_572 2 2 0.000481684
Oryza sativa ssp. japonica chr04 6 CH_osa_600 2 2 0.000158437
Pisum sativum chr6LG2 6 CH_psa_760 2 4 0.000938861
Quercus lobata 9 6 CH_qlo_862 3 4 0.000000319847
Solanum lycopersicum SL4.0ch03 6 CH_sly_833 2 2 0.000352164
Solanum tuberosum ST4.03ch04 6 CH_stu_938 2 2 0.000768679
Solanum tuberosum ST4.03ch06 6 CH_stu_939 2 2 0.000768679
Theobroma cacao Chromosome_8 6 CH_tca_700 2 2 0.000439432

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001