Functional clusters
Information
- Type InterPro
- Description Prolyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica napus | A01 | 5 | CH_bna_738 | 3 | 3 | 0.00000550917 |
| Brassica rapa | A01 | 5 | CH_bra_246 | 3 | 3 | 0.00000315177 |
| Cardamine hirsuta | Chr7 | 5 | CH_chi_352 | 3 | 3 | 0.00000260868 |
| Lupinus albus | Lalb_Chr03 | 5 | CH_lal_289 | 3 | 3 | 0.00000280957 |
| Medicago truncatula | chr8 | 5 | CH_mtr_220 | 5 | 5 | 0.00000000000018314 |
| Medicago truncatula | chr3 | 5 | CH_mtr_868 | 3 | 5 | 0.0000206522 |
| Papaver somniferum | NW_020625486.1 | 5 | CH_pso_121 | 8 | 50 | 0.00000000000000153521 |
| Brassica napus | A01 | 6 | CH_bna_738 | 3 | 3 | 0.00000550917 |
| Brassica rapa | A01 | 6 | CH_bra_246 | 3 | 3 | 0.00000315177 |
| Cardamine hirsuta | Chr7 | 6 | CH_chi_352 | 3 | 3 | 0.00000260868 |
| Cucumis melo | chr05 | 6 | CH_cme_203 | 3 | 3 | 0.0000011015 |
| Lupinus albus | Lalb_Chr03 | 6 | CH_lal_289 | 3 | 3 | 0.00000280957 |
| Medicago truncatula | chr8 | 6 | CH_mtr_220 | 5 | 5 | 0.00000000000018314 |
| Medicago truncatula | chr3 | 6 | CH_mtr_868 | 3 | 5 | 0.0000206522 |
| Papaver somniferum | NW_020625486.1 | 6 | CH_pso_121 | 8 | 50 | 0.00000000000000153521 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |