Functional clusters
Information
- Type InterPro
- Description Glycoside hydrolase family 10
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Actinidia chinensis | Lachesis_group12 | 5 | CH_ach_136 | 3 | 3 | 0.000000371811 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.16 | 5 | CH_arhy_730 | 3 | 4 | 0.00000612955 |
| Brassica napus | C07 | 5 | CH_bna_70 | 6 | 9 | 2.25907e-16 |
| Brassica oleracea | C7 | 5 | CH_bol_63 | 5 | 7 | 0.000000000000102829 |
| Coffea canephora | chr10 | 5 | CH_ccan_211 | 3 | 18 | 0.000000647461 |
| Cardamine hirsuta | Chr7 | 5 | CH_chi_108 | 5 | 6 | 0.0000000000020562 |
| Cardamine hirsuta | Chr5 | 5 | CH_chi_401 | 3 | 4 | 0.0000104314 |
| Prunus persica | Pp08 | 5 | CH_ppe_140 | 5 | 7 | 0.000000000000102419 |
| Salvia bowleyana | GWHASIU00000002 | 5 | CH_sbo_150 | 5 | 6 | 0.00000000000165197 |
| Simmondsia chinensis | GWHAASQ00000008 | 5 | CH_sci_39 | 5 | 5 | 0.0000000000000496742 |
| Trifolium pratense | Tp57577_TGAC_v2_LG1 | 5 | CH_tpr_33 | 6 | 6 | 4.47997e-16 |
| Utricularia gibba | unitig_747 | 5 | CH_ugi_290 | 2 | 2 | 0.000246144 |
| Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_105 | 4 | 4 | 0.0000000000842619 |
| Vigna mungo | CM024072.1 | 5 | CH_vmu_605 | 2 | 2 | 0.000646141 |
| Actinidia chinensis | Lachesis_group12 | 6 | CH_ach_136 | 3 | 3 | 0.000000371811 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.16 | 6 | CH_arhy_730 | 3 | 4 | 0.00000612955 |
| Brassica napus | C07 | 6 | CH_bna_70 | 6 | 9 | 2.25907e-16 |
| Brassica oleracea | C7 | 6 | CH_bol_63 | 5 | 7 | 0.000000000000102829 |
| Coffea canephora | chr10 | 6 | CH_ccan_211 | 3 | 18 | 0.000000647461 |
| Cardamine hirsuta | Chr7 | 6 | CH_chi_108 | 5 | 6 | 0.0000000000020562 |
| Cardamine hirsuta | Chr5 | 6 | CH_chi_401 | 3 | 4 | 0.0000104314 |
| Fragaria x ananassa | Fvb2-2 | 6 | CH_fan_851 | 3 | 10 | 0.000124603 |
| Prunus persica | Pp08 | 6 | CH_ppe_140 | 5 | 7 | 0.000000000000102419 |
| Salvia bowleyana | GWHASIU00000002 | 6 | CH_sbo_150 | 5 | 6 | 0.00000000000165197 |
| Simmondsia chinensis | GWHAASQ00000008 | 6 | CH_sci_39 | 5 | 5 | 0.0000000000000496742 |
| Trifolium pratense | Tp57577_TGAC_v2_LG1 | 6 | CH_tpr_33 | 6 | 6 | 4.47997e-16 |
| Utricularia gibba | unitig_747 | 6 | CH_ugi_290 | 2 | 2 | 0.000246144 |
| Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_105 | 4 | 4 | 0.0000000000842619 |
| Vigna mungo | CM024072.1 | 6 | CH_vmu_605 | 2 | 2 | 0.000646141 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |