Functional clusters

Information

  • Type InterPro
  • Description Trans-isoprenyl diphosphate synthases, bacterial-type

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aquilegia oxysepala CHR01 5 CH_aox_470 2 2 0.000481193
Amborella trichopoda AmTr_v1.0_scaffold00133 5 CH_atr_554 2 2 0.000476644
Beta vulgaris Chr4_EL10_PGA_scaffold1 5 CH_bvu_411 2 2 0.000248375
Corylus avellana 5 5 CH_cav_768 2 3 0.000689981
Carica papaya supercontig_119 5 CH_cpa_276 2 2 0.0000950661
Chenopodium quinoa C_Quinoa_Scaffold_3107 5 CH_cqu_980 2 2 0.000710732
Chenopodium quinoa C_Quinoa_Scaffold_2088 5 CH_cqu_981 2 2 0.000710732
Eucalyptus grandis Chr06 5 CH_egr_1267 2 2 0.000351165
Malus domestica Chr11 5 CH_mdo_541 3 4 0.000000483139
Quercus lobata 8 5 CH_qlo_348 5 9 0.000000000000140984
Rhododendron simsii chr11 5 CH_rsi_771 2 2 0.000193592
Simmondsia chinensis GWHAASQ00000016 5 CH_sci_440 2 2 0.000510856
Simmondsia chinensis GWHAASQ00000009 5 CH_sci_441 2 2 0.000510856
Selenicereus undatus Scaffold_33680 5 CH_sun_258 2 2 0.000217992
Aquilegia oxysepala CHR01 6 CH_aox_470 2 2 0.000481193
Amborella trichopoda AmTr_v1.0_scaffold00133 6 CH_atr_554 2 2 0.000476644
Beta vulgaris Chr4_EL10_PGA_scaffold1 6 CH_bvu_411 2 2 0.000248375
Corylus avellana 5 6 CH_cav_768 2 3 0.000689981
Carica papaya supercontig_119 6 CH_cpa_276 2 2 0.0000950661
Chenopodium quinoa C_Quinoa_Scaffold_3107 6 CH_cqu_980 2 2 0.000710732
Chenopodium quinoa C_Quinoa_Scaffold_2088 6 CH_cqu_981 2 2 0.000710732
Eucalyptus grandis Chr06 6 CH_egr_1267 2 2 0.000351165
Malus domestica Chr11 6 CH_mdo_541 3 4 0.000000483139
Quercus lobata 8 6 CH_qlo_348 5 9 0.000000000000140984
Rhododendron simsii chr11 6 CH_rsi_771 2 2 0.000193592
Simmondsia chinensis GWHAASQ00000016 6 CH_sci_440 2 2 0.000510856
Simmondsia chinensis GWHAASQ00000009 6 CH_sci_441 2 2 0.000510856
Selenicereus undatus Scaffold_33680 6 CH_sun_258 2 2 0.000217992

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001