Functional clusters
Information
- Type InterPro
- Description Transcription factor LUX/BOA-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Capsicum annuum | PGAv.1.6.scaffold125 | 5 | CH_can_610 | 3 | 12 | 0.000125899 |
| Hydrangea macrophylla | Hma1.2p1_0615F.1 | 5 | CH_hma_478 | 2 | 2 | 0.000111086 |
| Lonicera japonica | GWHAAZE00000002 | 5 | CH_lonja_845 | 3 | 17 | 0.000127827 |
| Nelumbo nucifera | chr2 | 5 | CH_nnu_614 | 2 | 2 | 0.000722526 |
| Olea europaea | scaffold424 | 5 | CH_oeu_128 | 4 | 7 | 0.0000000488236 |
| Vanilla planifolia | CM028150.1 | 5 | CH_vpl_195 | 4 | 16 | 0.00000108678 |
| Capsicum annuum | PGAv.1.6.scaffold125 | 6 | CH_can_610 | 3 | 12 | 0.000125899 |
| Hydrangea macrophylla | Hma1.2p1_0615F.1 | 6 | CH_hma_478 | 2 | 2 | 0.000111086 |
| Lonicera japonica | GWHAAZE00000002 | 6 | CH_lonja_845 | 3 | 17 | 0.000127827 |
| Nelumbo nucifera | chr2 | 6 | CH_nnu_614 | 2 | 2 | 0.000722526 |
| Olea europaea | scaffold424 | 6 | CH_oeu_128 | 4 | 7 | 0.0000000488236 |
| Vanilla planifolia | CM028150.1 | 6 | CH_vpl_195 | 4 | 16 | 0.00000108678 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |