Functional clusters

Information

  • Type InterPro
  • Description Protein NDR1-like

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr10 5 CH_acertr_383 3 4 0.00000166964
Arabidopsis lyrata scaffold_3 5 CH_aly_366 3 3 0.00000869167
Arabidopsis lyrata scaffold_6 5 CH_aly_403 3 4 0.00003475
Aquilegia oxysepala CHR05 5 CH_aox_238 3 3 0.00000438992
Aquilegia oxysepala CHR04 5 CH_aox_239 3 3 0.00000438992
Aquilegia oxysepala CHR01 5 CH_aox_78 5 10 0.000000000234413
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.12 5 CH_arhy_337 4 4 0.000000000246346
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.02 5 CH_arhy_338 4 4 0.000000000246346
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.10 5 CH_arhy_702 3 4 0.00000438756
Arabidopsis thaliana Chr2 5 CH_ath_342 3 5 0.0000163679
Arabidopsis thaliana Chr3 5 CH_ath_343 3 5 0.0000163679
Amborella trichopoda AmTr_v1.0_scaffold00037 5 CH_atr_322 3 6 0.0000158935
Brassica carinata ChrB06 5 CH_bca_1120 3 3 0.0000200558
Brassica carinata ChrC05 5 CH_bca_1360 3 4 0.0000801877
Brassica napus C05 5 CH_bna_845 3 3 0.0000151218
Beta vulgaris Chr4_EL10_PGA_scaffold1 5 CH_bvu_235 3 3 0.000000863699
Cannabis sativa NC_044379.1 5 CH_cansat_98 5 9 0.0000000000351407
Capsicum annuum PGAv.1.6.scaffold1245 5 CH_can_211 4 4 0.00000000230894
Cicer arietinum L. Ca_LG3_v3 5 CH_car_114 3 3 0.0000014993
Corylus avellana 10 5 CH_cav_87 6 12 0.000000000000440252
Citrus clementina scaffold_2 5 CH_ccl_121 5 5 0.000000000000156937
Ceratophyllum demersum 6 5 CH_cde_132 3 3 0.00000205855
Carpinus fangiana scaffold9 5 CH_cfa_344 3 3 0.0000083372
Carpinus fangiana Cfa07 5 CH_cfa_373 3 4 0.0000333324
Carpinus fangiana Cfa07 5 CH_cfa_60 6 6 0.0000000000000015216
Carya illinoinensis Chr10 5 CH_cil_258 4 4 0.00000000522625
Carya illinoinensis Chr09 5 CH_cil_451 4 13 0.00000372075
Citrullus lanatus CG_Chr10 5 CH_cla_142 3 3 0.00000194784
Carica papaya supercontig_81 5 CH_cpa_681 2 2 0.000950661
Chenopodium quinoa C_Quinoa_Scaffold_1529 5 CH_cqu_118 5 5 0.000000000000233955
Chenopodium quinoa C_Quinoa_Scaffold_1373 5 CH_cqu_218 4 4 0.000000000759579
Cucumis sativus L. chr3 5 CH_csa_34 7 7 5.1852e-19
Daucus carota DCARv2_Chr6 5 CH_dca_241 4 6 0.000000477004
Daucus carota DCARv2_Chr2 5 CH_dca_32 7 8 1.81076e-16
Daucus carota DCARv2_Chr6 5 CH_dca_375 3 3 0.0000332901
Daucus carota DCARv2_Chr5 5 CH_dca_476 3 4 0.000133061
Daucus carota DCARv2_Chr5 5 CH_dca_579 3 5 0.000332402
Durio zibethinus NW_019167982.1 5 CH_dzi_311 3 3 0.00000741152
Eucalyptus grandis Chr11 5 CH_egr_413 5 6 0.00000000000452331
Erythranthe guttata scaffold_13 5 CH_egut_109 8 39 0.0000000000000446079
Erythranthe guttata scaffold_10 5 CH_egut_410 3 3 0.0000090667
Fragaria vesca Fvb6 5 CH_fve_246 4 4 0.00000000775927
Fragaria vesca Fvb6 5 CH_fve_736 3 7 0.000418201
Fragaria vesca Fvb6 5 CH_fve_803 3 8 0.000668776
Gossypium hirsutum A10 5 CH_ghi_1166 3 7 0.000461179
Gossypium hirsutum D10 5 CH_ghi_722 3 3 0.0000131984
Glycine max Gm10 5 CH_gma_224 5 10 0.00000000225242
Glycine max Gm19 5 CH_gma_276 4 4 0.0000000134933
Glycine max Gm03 5 CH_gma_51 7 7 3.62259e-18
Glycine max Gm07 5 CH_gma_523 3 3 0.0000197493
Gossypium raimondii Chr11 5 CH_gra_395 3 4 0.0000265466
Helianthus annuus HanXRQChr17 5 CH_han_608 3 3 0.00000297913
Helianthus annuus HanXRQChr09 5 CH_han_876 3 7 0.000104153
Helianthus annuus HanXRQChr03 5 CH_han_96 6 6 1.05226e-16
Hydrangea macrophylla Hma1.2p1_0729F.1 5 CH_hma_191 3 3 0.00000155495
Lupinus albus Lalb_Chr02 5 CH_lal_302 3 3 0.00000337148
Lotus japonicus chr1 5 CH_lja_120 4 4 0.00000000656585
Lotus japonicus chr5 5 CH_lja_226 4 8 0.000000458651
Lactuca sativa Lsat_1_v8_lg_6 5 CH_lsa_28 10 17 1.12649e-24
Lactuca sativa Lsat_1_v8_lg_3 5 CH_lsa_519 3 3 0.00000911523
Magnolia biondii Chr18 5 CH_mbi_142 6 12 0.00000000000129015
Magnolia biondii Chr17 5 CH_mbi_31 12 63 2.10322e-23
Malus domestica Chr14 5 CH_mdo_150 6 12 0.000000000000612922
Malus domestica Chr12 5 CH_mdo_297 6 38 0.00000000181339
Malus domestica Chr03 5 CH_mdo_701 3 3 0.00000706654
Medicago truncatula chr7 5 CH_mtr_192 7 13 0.0000000000000248159
Medicago truncatula chr5 5 CH_mtr_359 5 7 0.000000000486809
Medicago truncatula chr6 5 CH_mtr_461 7 67 0.000000012119
Medicago truncatula chr1 5 CH_mtr_496 5 13 0.0000000297114
Medicago truncatula chr5 5 CH_mtr_624 4 6 0.000000423141
Nelumbo nucifera chr1 5 CH_nnu_299 3 3 0.00000616374
Nelumbo nucifera chr1 5 CH_nnu_348 3 4 0.0000246455
Nelumbo nucifera chr6 5 CH_nnu_35 7 13 4.13048e-16
Nelumbo nucifera chr2 5 CH_nnu_98 5 9 0.000000000170941
Nicotiana tabacum Nitab4.5_0000020 5 CH_nta_168 3 8 0.000035361
Olea europaea scaffold218 5 CH_oeu_170 4 7 0.00000037869
Oryza sativa ssp. japonica chr12 5 CH_osa_461 3 5 0.0000476608
Prunus persica Pp07 5 CH_ppe_41 9 9 2.77956e-24
Prunus persica Pp04 5 CH_ppe_521 3 3 0.0000191986
Pisum sativum chr6LG2 5 CH_psa_284 4 10 0.00000112812
Pisum sativum chr3LG5 5 CH_psa_81 5 5 0.00000000000295077
Papaver somniferum NC_039358.1 5 CH_pso_233 5 5 0.0000000000201431
Papaver somniferum NC_039362.1 5 CH_pso_413 4 4 0.0000000279391
Papaver somniferum NC_039358.1 5 CH_pso_414 4 4 0.0000000279391
Papaver somniferum NC_039363.1 5 CH_pso_483 4 5 0.000000139614
Papaver somniferum NC_039358.1 5 CH_pso_484 4 5 0.000000139614
Papaver somniferum NC_039362.1 5 CH_pso_63 8 10 3.0839e-19
Papaver somniferum NC_039360.1 5 CH_pso_829 3 3 0.0000381567
Phaseolus vulgaris Chr01 5 CH_pvu_105 5 5 0.00000000000254194
Phaseolus vulgaris Chr07 5 CH_pvu_183 4 4 0.00000000461244
Quercus lobata 5 5 CH_qlo_1012 3 3 0.00000271892
Quercus lobata 7 5 CH_qlo_119 8 9 6.74097e-23
Rosa chinensis RcHm_v2.0_Chr5 5 CH_rch_1184 3 6 0.000174002
Rosa chinensis RcHm_v2.0_Chr3 5 CH_rch_231 6 10 0.00000000000022566
Rosa chinensis RcHm_v2.0_Chr3 5 CH_rch_445 4 4 0.00000000451453
Rosa chinensis RcHm_v2.0_Chr3 5 CH_rch_842 3 3 0.00000871079
Rhododendron simsii chr07 5 CH_rsi_484 4 13 0.00000104593
Rhododendron simsii chr13 5 CH_rsi_530 3 3 0.00000349805
Salvia bowleyana GWHASIU00000005 5 CH_sbo_403 3 4 0.00000695388
Salix brachista GWHAAZH00000016 5 CH_sbr_66 8 26 3.9252e-16
Simmondsia chinensis GWHAASQ00000006 5 CH_sci_194 3 3 0.00000239236
Sechium edule LG02 5 CH_sed_118 4 4 0.00000000964697
Sechium edule LG14 5 CH_sed_271 3 3 0.0000135212
Sechium edule LG12 5 CH_sed_74 5 6 0.0000000000392111
Sequoiadendron giganteum chr8 5 CH_sgi_1293 3 4 0.00000119594
Solanum lycopersicum SL4.0ch01 5 CH_sly_402 3 3 0.00000147795
Solanum lycopersicum SL4.0ch10 5 CH_sly_403 3 3 0.00000147795
Schrenkiella parvula ch3-1 5 CH_spa_98 4 5 0.0000000437969
Solanum pennellii Spenn-ch10 5 CH_spe_162 4 4 0.000000000480494
Solanum pennellii Spenn-ch01 5 CH_spe_375 3 3 0.00000166188
Solanum tuberosum ST4.03ch10 5 CH_stu_242 4 4 0.00000000156495
Solanum tuberosum ST4.03ch01 5 CH_stu_461 3 3 0.0000038171
Trochodendron aralioides group3 5 CH_tar_160 4 4 0.00000000474923
Trochodendron aralioides group0 5 CH_tar_413 3 3 0.0000083264
Trifolium pratense Tp57577_TGAC_v2_LG6 5 CH_tpr_207 4 5 0.0000000822585
Trifolium pratense Tp57577_TGAC_v2_scaf_233 5 CH_tpr_415 3 3 0.0000197696
Trifolium pratense Tp57577_TGAC_v2_LG1 5 CH_tpr_519 3 4 0.0000790259
Tripterygium wilfordii NC_052252.1 5 CH_twi_265 3 3 0.00000531507
Vigna mungo CM024070.1 5 CH_vmu_250 3 3 0.00000511034
Vanilla planifolia CM028152.1 5 CH_vpl_80 4 4 0.00000000086536
Acer truncatum chr10 6 CH_acertr_383 3 4 0.00000166964
Arabidopsis lyrata scaffold_3 6 CH_aly_366 3 3 0.00000869167
Arabidopsis lyrata scaffold_6 6 CH_aly_403 3 4 0.00003475
Aquilegia oxysepala CHR05 6 CH_aox_238 3 3 0.00000438992
Aquilegia oxysepala CHR04 6 CH_aox_239 3 3 0.00000438992
Aquilegia oxysepala CHR01 6 CH_aox_78 5 10 0.000000000234413
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.12 6 CH_arhy_337 4 4 0.000000000246346
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.02 6 CH_arhy_338 4 4 0.000000000246346
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.10 6 CH_arhy_702 3 4 0.00000438756
Arabidopsis thaliana Chr2 6 CH_ath_342 3 5 0.0000163679
Arabidopsis thaliana Chr3 6 CH_ath_343 3 5 0.0000163679
Amborella trichopoda AmTr_v1.0_scaffold00037 6 CH_atr_322 3 6 0.0000158935
Brassica carinata ChrB06 6 CH_bca_1120 3 3 0.0000200558
Brassica carinata ChrC05 6 CH_bca_1360 3 4 0.0000801877
Brassica napus C05 6 CH_bna_845 3 3 0.0000151218
Beta vulgaris Chr4_EL10_PGA_scaffold1 6 CH_bvu_235 3 3 0.000000863699
Cannabis sativa NC_044379.1 6 CH_cansat_98 5 9 0.0000000000351407
Capsicum annuum PGAv.1.6.scaffold1245 6 CH_can_211 4 4 0.00000000230894
Cicer arietinum L. Ca_LG3_v3 6 CH_car_114 3 3 0.0000014993
Corylus avellana 10 6 CH_cav_87 6 12 0.000000000000440252
Citrus clementina scaffold_2 6 CH_ccl_121 5 5 0.000000000000156937
Ceratophyllum demersum 6 6 CH_cde_132 3 3 0.00000205855
Carpinus fangiana scaffold9 6 CH_cfa_344 3 3 0.0000083372
Carpinus fangiana Cfa07 6 CH_cfa_373 3 4 0.0000333324
Carpinus fangiana Cfa07 6 CH_cfa_60 6 6 0.0000000000000015216
Carya illinoinensis Chr10 6 CH_cil_258 4 4 0.00000000522625
Carya illinoinensis Chr09 6 CH_cil_451 4 13 0.00000372075
Citrullus lanatus CG_Chr10 6 CH_cla_142 3 3 0.00000194784
Cucumis melo chr04 6 CH_cme_21 8 8 8.11075e-23
Carica papaya supercontig_81 6 CH_cpa_681 2 2 0.000950661
Chenopodium quinoa C_Quinoa_Scaffold_1529 6 CH_cqu_118 5 5 0.000000000000233955
Chenopodium quinoa C_Quinoa_Scaffold_1373 6 CH_cqu_218 4 4 0.000000000759579
Cucumis sativus L. chr3 6 CH_csa_34 7 7 5.1852e-19
Daucus carota DCARv2_Chr6 6 CH_dca_241 4 6 0.000000477004
Daucus carota DCARv2_Chr2 6 CH_dca_32 7 8 1.81076e-16
Daucus carota DCARv2_Chr6 6 CH_dca_375 3 3 0.0000332901
Daucus carota DCARv2_Chr5 6 CH_dca_476 3 4 0.000133061
Daucus carota DCARv2_Chr5 6 CH_dca_579 3 5 0.000332402
Durio zibethinus NW_019167982.1 6 CH_dzi_311 3 3 0.00000741152
Eucalyptus grandis Chr11 6 CH_egr_413 5 6 0.00000000000452331
Erythranthe guttata scaffold_13 6 CH_egut_109 8 39 0.0000000000000446079
Erythranthe guttata scaffold_10 6 CH_egut_410 3 3 0.0000090667
Fragaria x ananassa Fvb6-1 6 CH_fan_444 4 8 0.00000101783
Fragaria x ananassa Fvb6-4 6 CH_fan_822 3 4 0.0000983676
Fragaria x ananassa Fvb6-1 6 CH_fan_823 3 4 0.0000983676
Fragaria vesca Fvb6 6 CH_fve_246 4 4 0.00000000775927
Fragaria vesca Fvb6 6 CH_fve_736 3 7 0.000418201
Fragaria vesca Fvb6 6 CH_fve_803 3 8 0.000668776
Gossypium hirsutum A10 6 CH_ghi_1166 3 7 0.000461179
Gossypium hirsutum D10 6 CH_ghi_722 3 3 0.0000131984
Glycine max Gm10 6 CH_gma_224 5 10 0.00000000225242
Glycine max Gm19 6 CH_gma_276 4 4 0.0000000134933
Glycine max Gm03 6 CH_gma_51 7 7 3.62259e-18
Glycine max Gm07 6 CH_gma_523 3 3 0.0000197493
Gossypium raimondii Chr11 6 CH_gra_395 3 4 0.0000265466
Helianthus annuus HanXRQChr17 6 CH_han_608 3 3 0.00000297913
Helianthus annuus HanXRQChr09 6 CH_han_876 3 7 0.000104153
Helianthus annuus HanXRQChr03 6 CH_han_96 6 6 1.05226e-16
Hydrangea macrophylla Hma1.2p1_0729F.1 6 CH_hma_191 3 3 0.00000155495
Lupinus albus Lalb_Chr02 6 CH_lal_302 3 3 0.00000337148
Lotus japonicus chr1 6 CH_lja_120 4 4 0.00000000656585
Lotus japonicus chr5 6 CH_lja_226 4 8 0.000000458651
Lactuca sativa Lsat_1_v8_lg_6 6 CH_lsa_28 10 17 1.12649e-24
Lactuca sativa Lsat_1_v8_lg_3 6 CH_lsa_519 3 3 0.00000911523
Magnolia biondii Chr18 6 CH_mbi_142 6 12 0.00000000000129015
Magnolia biondii Chr17 6 CH_mbi_31 12 63 2.10322e-23
Malus domestica Chr14 6 CH_mdo_150 6 12 0.000000000000612922
Malus domestica Chr12 6 CH_mdo_297 6 38 0.00000000181339
Malus domestica Chr03 6 CH_mdo_701 3 3 0.00000706654
Medicago truncatula chr7 6 CH_mtr_192 7 13 0.0000000000000248159
Medicago truncatula chr5 6 CH_mtr_359 5 7 0.000000000486809
Medicago truncatula chr6 6 CH_mtr_461 7 67 0.000000012119
Medicago truncatula chr1 6 CH_mtr_496 5 13 0.0000000297114
Medicago truncatula chr5 6 CH_mtr_624 4 6 0.000000423141
Nelumbo nucifera chr1 6 CH_nnu_299 3 3 0.00000616374
Nelumbo nucifera chr1 6 CH_nnu_348 3 4 0.0000246455
Nelumbo nucifera chr6 6 CH_nnu_35 7 13 4.13048e-16
Nelumbo nucifera chr2 6 CH_nnu_98 5 9 0.000000000170941
Nicotiana tabacum Nitab4.5_0000020 6 CH_nta_168 3 8 0.000035361
Olea europaea scaffold218 6 CH_oeu_170 4 7 0.00000037869
Oryza sativa ssp. japonica chr12 6 CH_osa_461 3 5 0.0000476608
Prunus persica Pp07 6 CH_ppe_41 9 9 2.77956e-24
Prunus persica Pp04 6 CH_ppe_521 3 3 0.0000191986
Pisum sativum chr6LG2 6 CH_psa_284 4 10 0.00000112812
Pisum sativum chr3LG5 6 CH_psa_81 5 5 0.00000000000295077
Papaver somniferum NC_039358.1 6 CH_pso_233 5 5 0.0000000000201431
Papaver somniferum NC_039362.1 6 CH_pso_413 4 4 0.0000000279391
Papaver somniferum NC_039358.1 6 CH_pso_414 4 4 0.0000000279391
Papaver somniferum NC_039363.1 6 CH_pso_483 4 5 0.000000139614
Papaver somniferum NC_039358.1 6 CH_pso_484 4 5 0.000000139614
Papaver somniferum NC_039362.1 6 CH_pso_63 8 10 3.0839e-19
Papaver somniferum NC_039360.1 6 CH_pso_829 3 3 0.0000381567
Phaseolus vulgaris Chr01 6 CH_pvu_105 5 5 0.00000000000254194
Phaseolus vulgaris Chr07 6 CH_pvu_183 4 4 0.00000000461244
Quercus lobata 5 6 CH_qlo_1012 3 3 0.00000271892
Quercus lobata 7 6 CH_qlo_119 8 9 6.74097e-23
Rosa chinensis RcHm_v2.0_Chr5 6 CH_rch_1184 3 6 0.000174002
Rosa chinensis RcHm_v2.0_Chr3 6 CH_rch_231 6 10 0.00000000000022566
Rosa chinensis RcHm_v2.0_Chr3 6 CH_rch_445 4 4 0.00000000451453
Rosa chinensis RcHm_v2.0_Chr3 6 CH_rch_842 3 3 0.00000871079
Rhododendron simsii chr07 6 CH_rsi_484 4 13 0.00000104593
Rhododendron simsii chr13 6 CH_rsi_530 3 3 0.00000349805
Salvia bowleyana GWHASIU00000005 6 CH_sbo_403 3 4 0.00000695388
Salix brachista GWHAAZH00000016 6 CH_sbr_66 8 26 3.9252e-16
Simmondsia chinensis GWHAASQ00000006 6 CH_sci_194 3 3 0.00000239236
Sechium edule LG02 6 CH_sed_118 4 4 0.00000000964697
Sechium edule LG14 6 CH_sed_271 3 3 0.0000135212
Sechium edule LG12 6 CH_sed_74 5 6 0.0000000000392111
Sequoiadendron giganteum chr8 6 CH_sgi_1293 3 4 0.00000119594
Solanum lycopersicum SL4.0ch01 6 CH_sly_402 3 3 0.00000147795
Solanum lycopersicum SL4.0ch10 6 CH_sly_403 3 3 0.00000147795
Schrenkiella parvula ch3-1 6 CH_spa_98 4 5 0.0000000437969
Solanum pennellii Spenn-ch10 6 CH_spe_162 4 4 0.000000000480494
Solanum pennellii Spenn-ch01 6 CH_spe_375 3 3 0.00000166188
Solanum tuberosum ST4.03ch10 6 CH_stu_242 4 4 0.00000000156495
Solanum tuberosum ST4.03ch01 6 CH_stu_461 3 3 0.0000038171
Trochodendron aralioides group3 6 CH_tar_160 4 4 0.00000000474923
Trochodendron aralioides group0 6 CH_tar_413 3 3 0.0000083264
Trifolium pratense Tp57577_TGAC_v2_LG6 6 CH_tpr_207 4 5 0.0000000822585
Trifolium pratense Tp57577_TGAC_v2_scaf_233 6 CH_tpr_415 3 3 0.0000197696
Trifolium pratense Tp57577_TGAC_v2_LG1 6 CH_tpr_519 3 4 0.0000790259
Tripterygium wilfordii NC_052252.1 6 CH_twi_265 3 3 0.00000531507
Vigna mungo CM024070.1 6 CH_vmu_250 3 3 0.00000511034
Vanilla planifolia CM028152.1 6 CH_vpl_80 4 4 0.00000000086536

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001