Functional clusters
Information
- Type InterPro
- Description Patellin
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis lyrata | scaffold_2 | 5 | CH_aly_742 | 2 | 2 | 0.000990066 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_5 | 5 | CH_amhyb_417 | 2 | 2 | 0.000505051 |
| Brassica carinata | ChrC03 | 5 | CH_bca_899 | 3 | 3 | 0.00000308103 |
| Brassica carinata | ChrC08 | 5 | CH_bca_900 | 3 | 3 | 0.00000308103 |
| Brassica carinata | ChrB05 | 5 | CH_bca_901 | 3 | 3 | 0.00000308103 |
| Camellia sinensis var. sinensis | Contig1142 | 5 | CH_camsi_1560 | 2 | 2 | 0.000962949 |
| Capsicum annuum | PGAv.1.6.scaffold660 | 5 | CH_can_832 | 2 | 3 | 0.000743443 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4250 | 5 | CH_cqu_443 | 3 | 3 | 0.00000153229 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1606 | 5 | CH_cqu_444 | 3 | 3 | 0.00000153229 |
| Hydrangea macrophylla | Hma1.2p1_0273F.1 | 5 | CH_hma_673 | 2 | 2 | 0.000666519 |
| Marchantia polymorpha | scaffold_54 | 5 | CH_mpo_228 | 2 | 3 | 0.000993889 |
| Petunia axillaris | Peaxi162Scf00688 | 5 | CH_pax_185 | 3 | 3 | 0.0000000742514 |
| Simmondsia chinensis | GWHAASQ00000023 | 5 | CH_sci_152 | 3 | 3 | 0.000000380603 |
| Solanum lycopersicum | SL4.0ch11 | 5 | CH_sly_658 | 3 | 17 | 0.000122788 |
| Arabidopsis lyrata | scaffold_2 | 6 | CH_aly_742 | 2 | 2 | 0.000990066 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_5 | 6 | CH_amhyb_417 | 2 | 2 | 0.000505051 |
| Brassica carinata | ChrC03 | 6 | CH_bca_899 | 3 | 3 | 0.00000308103 |
| Brassica carinata | ChrC08 | 6 | CH_bca_900 | 3 | 3 | 0.00000308103 |
| Brassica carinata | ChrB05 | 6 | CH_bca_901 | 3 | 3 | 0.00000308103 |
| Camellia sinensis var. sinensis | Contig1142 | 6 | CH_camsi_1560 | 2 | 2 | 0.000962949 |
| Capsicum annuum | PGAv.1.6.scaffold660 | 6 | CH_can_832 | 2 | 3 | 0.000743443 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4250 | 6 | CH_cqu_443 | 3 | 3 | 0.00000153229 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1606 | 6 | CH_cqu_444 | 3 | 3 | 0.00000153229 |
| Hydrangea macrophylla | Hma1.2p1_0273F.1 | 6 | CH_hma_673 | 2 | 2 | 0.000666519 |
| Marchantia polymorpha | scaffold_54 | 6 | CH_mpo_228 | 2 | 3 | 0.000993889 |
| Petunia axillaris | Peaxi162Scf00688 | 6 | CH_pax_185 | 3 | 3 | 0.0000000742514 |
| Simmondsia chinensis | GWHAASQ00000023 | 6 | CH_sci_152 | 3 | 3 | 0.000000380603 |
| Solanum lycopersicum | SL4.0ch11 | 6 | CH_sly_658 | 3 | 17 | 0.000122788 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |