Functional clusters
Information
- Type InterPro
- Description Protein MAINTENANCE OF MERISTEMS-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-10 | 5 | CH_aar_451 | 2 | 2 | 0.000912326 |
| Actinidia chinensis | Lachesis_group2 | 5 | CH_ach_480 | 2 | 2 | 0.000325928 |
| Arabidopsis lyrata | scaffold_1 | 5 | CH_aly_317 | 3 | 3 | 0.00000186904 |
| Aquilegia oxysepala | CHR05 | 5 | CH_aox_291 | 3 | 4 | 0.0000262309 |
| Arabidopsis thaliana | Chr1 | 5 | CH_ath_49 | 6 | 16 | 0.00000000000000596228 |
| Brassica carinata | ChrB07 | 5 | CH_bca_27 | 11 | 74 | 9.15434e-22 |
| Brassica rapa | A06 | 5 | CH_bra_134 | 5 | 46 | 0.00000004465 |
| Beta vulgaris | Chr4_EL10_PGA_scaffold1 | 5 | CH_bvu_72 | 8 | 16 | 0.00000000000276308 |
| Corylus avellana | 4 | 5 | CH_cav_748 | 2 | 2 | 0.000460017 |
| Cardamine hirsuta | Chr1 | 5 | CH_chi_68 | 10 | 76 | 0.0000000000000015645 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1529 | 5 | CH_cqu_30 | 9 | 12 | 1.03549e-23 |
| Davidia involucrata | GWHABJS00000001 | 5 | CH_din_614 | 3 | 3 | 0.000196581 |
| Erigeron canadensis | Conyza_canadensis_scaffold:3 | 5 | CH_eca_668 | 4 | 18 | 0.000239843 |
| Eucalyptus grandis | Chr06 | 5 | CH_egr_1203 | 2 | 2 | 0.000175582 |
| Eutrema salsugineum | scaffold_7 | 5 | CH_esa_374 | 4 | 63 | 0.000163582 |
| Fragaria vesca | Fvb3 | 5 | CH_fve_49 | 8 | 13 | 3.09587e-18 |
| Lotus japonicus | chr6 | 5 | CH_lja_50 | 5 | 5 | 0.000000000000589009 |
| Lonicera japonica | GWHAAZE00000008 | 5 | CH_lonja_590 | 4 | 4 | 0.00000400236 |
| Olea europaea | chr6 | 5 | CH_oeu_156 | 4 | 5 | 0.000000187516 |
| Quercus lobata | 8 | 5 | CH_qlo_252 | 10 | 22 | 2.01719e-16 |
| Rhododendron simsii | chr06 | 5 | CH_rsi_182 | 6 | 6 | 0.000000000000913946 |
| Rhododendron simsii | chr09 | 5 | CH_rsi_391 | 6 | 22 | 0.0000000666348 |
| Solanum lycopersicum | SL4.0ch04 | 5 | CH_sly_24 | 15 | 27 | 1.0547e-26 |
| Solanum lycopersicum | SL4.0ch07 | 5 | CH_sly_511 | 4 | 5 | 0.0000181201 |
| Solanum tuberosum | ST4.03ch07 | 5 | CH_stu_883 | 3 | 8 | 0.00057221 |
| Trochodendron aralioides | group9 | 5 | CH_tar_479 | 4 | 46 | 0.0000519566 |
| Aethionema arabicum | LG-10 | 6 | CH_aar_451 | 2 | 2 | 0.000912326 |
| Actinidia chinensis | Lachesis_group2 | 6 | CH_ach_480 | 2 | 2 | 0.000325928 |
| Arabidopsis lyrata | scaffold_1 | 6 | CH_aly_317 | 3 | 3 | 0.00000186904 |
| Aquilegia oxysepala | CHR05 | 6 | CH_aox_291 | 3 | 4 | 0.0000262309 |
| Arabidopsis thaliana | Chr1 | 6 | CH_ath_49 | 6 | 16 | 0.00000000000000596228 |
| Brassica carinata | ChrB07 | 6 | CH_bca_27 | 11 | 74 | 9.15434e-22 |
| Brassica rapa | A06 | 6 | CH_bra_134 | 5 | 46 | 0.00000004465 |
| Beta vulgaris | Chr4_EL10_PGA_scaffold1 | 6 | CH_bvu_72 | 8 | 16 | 0.00000000000276308 |
| Corylus avellana | 4 | 6 | CH_cav_748 | 2 | 2 | 0.000460017 |
| Cardamine hirsuta | Chr1 | 6 | CH_chi_68 | 10 | 76 | 0.0000000000000015645 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1529 | 6 | CH_cqu_30 | 9 | 12 | 1.03549e-23 |
| Davidia involucrata | GWHABJS00000001 | 6 | CH_din_614 | 3 | 3 | 0.000196581 |
| Erigeron canadensis | Conyza_canadensis_scaffold:3 | 6 | CH_eca_668 | 4 | 18 | 0.000239843 |
| Eucalyptus grandis | Chr06 | 6 | CH_egr_1203 | 2 | 2 | 0.000175582 |
| Eutrema salsugineum | scaffold_7 | 6 | CH_esa_374 | 4 | 63 | 0.000163582 |
| Fragaria x ananassa | Fvb6-1 | 6 | CH_fan_1290 | 3 | 10 | 0.000997126 |
| Fragaria vesca | Fvb3 | 6 | CH_fve_49 | 8 | 13 | 3.09587e-18 |
| Lotus japonicus | chr6 | 6 | CH_lja_50 | 5 | 5 | 0.000000000000589009 |
| Lonicera japonica | GWHAAZE00000008 | 6 | CH_lonja_590 | 4 | 4 | 0.00000400236 |
| Olea europaea | chr6 | 6 | CH_oeu_156 | 4 | 5 | 0.000000187516 |
| Quercus lobata | 8 | 6 | CH_qlo_252 | 10 | 22 | 2.01719e-16 |
| Rhododendron simsii | chr06 | 6 | CH_rsi_182 | 6 | 6 | 0.000000000000913946 |
| Rhododendron simsii | chr09 | 6 | CH_rsi_391 | 6 | 22 | 0.0000000666348 |
| Solanum lycopersicum | SL4.0ch04 | 6 | CH_sly_24 | 15 | 27 | 1.0547e-26 |
| Solanum lycopersicum | SL4.0ch07 | 6 | CH_sly_511 | 4 | 5 | 0.0000181201 |
| Solanum tuberosum | ST4.03ch07 | 6 | CH_stu_883 | 3 | 8 | 0.00057221 |
| Trochodendron aralioides | group9 | 6 | CH_tar_479 | 4 | 46 | 0.0000519566 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |