Functional clusters
Information
- Type InterPro
- Description Serine/threonine-protein kinase-like protein CCR3/CCR4
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr3 | 5 | CH_acertr_1016 | 2 | 2 | 0.00070497 |
| Acer truncatum | chr12 | 5 | CH_acertr_1017 | 2 | 2 | 0.00070497 |
| Actinidia chinensis | Lachesis_group3 | 5 | CH_ach_479 | 2 | 2 | 0.000325928 |
| Ceratophyllum demersum | 5 | 5 | CH_cde_364 | 2 | 2 | 0.000236939 |
| Cardamine hirsuta | Chr6 | 5 | CH_chi_232 | 3 | 3 | 0.0000000286668 |
| Glycine max | Gm11 | 5 | CH_gma_191 | 4 | 5 | 0.000000000405968 |
| Glycine max | Gm18 | 5 | CH_gma_422 | 3 | 4 | 0.0000019014 |
| Manihot esculenta | Chromosome10 | 5 | CH_mes_120 | 5 | 6 | 0.0000000000000788353 |
| Oryza sativa ssp. japonica | chr11 | 5 | CH_osa_33 | 8 | 16 | 2.98647e-20 |
| Phaseolus vulgaris | Chr01 | 5 | CH_pvu_128 | 4 | 4 | 0.00000000004165 |
| Quercus lobata | 4 | 5 | CH_qlo_167 | 8 | 22 | 1.26578e-19 |
| Salix brachista | GWHAAZH00000009 | 5 | CH_sbr_713 | 2 | 2 | 0.000945209 |
| Selaginella moellendorffii | scaffold_2 | 5 | CH_smo_77 | 3 | 3 | 0.0000000523109 |
| Trochodendron aralioides | group7 | 5 | CH_tar_918 | 2 | 2 | 0.000600366 |
| Vaccinium macrocarpon | chr8_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_641 | 2 | 2 | 0.000278772 |
| Vigna mungo | CM024070.1 | 5 | CH_vmu_68 | 4 | 4 | 0.0000000000283278 |
| Vanilla planifolia | CM028151.1 | 5 | CH_vpl_325 | 3 | 11 | 0.0000269992 |
| Acer truncatum | chr3 | 6 | CH_acertr_1016 | 2 | 2 | 0.00070497 |
| Acer truncatum | chr12 | 6 | CH_acertr_1017 | 2 | 2 | 0.00070497 |
| Actinidia chinensis | Lachesis_group3 | 6 | CH_ach_479 | 2 | 2 | 0.000325928 |
| Ceratophyllum demersum | 5 | 6 | CH_cde_364 | 2 | 2 | 0.000236939 |
| Cardamine hirsuta | Chr6 | 6 | CH_chi_232 | 3 | 3 | 0.0000000286668 |
| Glycine max | Gm11 | 6 | CH_gma_191 | 4 | 5 | 0.000000000405968 |
| Glycine max | Gm18 | 6 | CH_gma_422 | 3 | 4 | 0.0000019014 |
| Manihot esculenta | Chromosome10 | 6 | CH_mes_120 | 5 | 6 | 0.0000000000000788353 |
| Oryza sativa ssp. japonica | chr11 | 6 | CH_osa_33 | 8 | 16 | 2.98647e-20 |
| Phaseolus vulgaris | Chr01 | 6 | CH_pvu_128 | 4 | 4 | 0.00000000004165 |
| Quercus lobata | 4 | 6 | CH_qlo_167 | 8 | 22 | 1.26578e-19 |
| Salix brachista | GWHAAZH00000009 | 6 | CH_sbr_713 | 2 | 2 | 0.000945209 |
| Selaginella moellendorffii | scaffold_2 | 6 | CH_smo_77 | 3 | 3 | 0.0000000523109 |
| Trochodendron aralioides | group7 | 6 | CH_tar_918 | 2 | 2 | 0.000600366 |
| Vaccinium macrocarpon | chr8_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_641 | 2 | 2 | 0.000278772 |
| Vigna mungo | CM024070.1 | 6 | CH_vmu_68 | 4 | 4 | 0.0000000000283278 |
| Vanilla planifolia | CM028151.1 | 6 | CH_vpl_325 | 3 | 11 | 0.0000269992 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |