Functional clusters
Information
- Type InterPro
- Description WRKY transcription factor, plant
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-2 | 5 | CH_aar_191 | 4 | 4 | 0.00000196968 |
| Brassica carinata | ChrB05 | 5 | CH_bca_688 | 7 | 31 | 0.000000561946 |
| Brassica napus | C03 | 5 | CH_bna_188 | 7 | 11 | 0.0000000000435885 |
| Brassica napus | A08 | 5 | CH_bna_27 | 11 | 14 | 2.61731e-21 |
| Brassica oleracea | C3 | 5 | CH_bol_641 | 4 | 7 | 0.000151449 |
| Brassica rapa | A08 | 5 | CH_bra_149 | 5 | 6 | 0.000000078666 |
| Camellia sinensis var. sinensis | Chr10 | 5 | CH_camsi_888 | 4 | 8 | 0.0000318441 |
| Capsicum annuum | PGAv.1.6.scaffold566 | 5 | CH_can_194 | 5 | 5 | 0.000000000908049 |
| Capsicum annuum | PGAv.1.6.scaffold947 | 5 | CH_can_644 | 3 | 3 | 0.000226241 |
| Corylus avellana | 6 | 5 | CH_cav_152 | 7 | 20 | 0.000000000595373 |
| Ceratophyllum demersum | 7 | 5 | CH_cde_49 | 6 | 10 | 0.00000000778384 |
| Davidia involucrata | GWHABJS00000017 | 5 | CH_din_492 | 4 | 8 | 0.0000795321 |
| Davidia involucrata | GWHABJS00000003 | 5 | CH_din_772 | 3 | 3 | 0.000502929 |
| Erigeron canadensis | Conyza_canadensis_scaffold:7 | 5 | CH_eca_452 | 4 | 8 | 0.0000127895 |
| Fragaria vesca | Fvb6 | 5 | CH_fve_223 | 6 | 14 | 0.00000000263255 |
| Helianthus annuus | HanXRQChr07 | 5 | CH_han_327 | 5 | 5 | 0.00000000305477 |
| Magnolia biondii | Chr07 | 5 | CH_mbi_1178 | 3 | 4 | 0.000617461 |
| Magnolia biondii | Chr15 | 5 | CH_mbi_289 | 6 | 16 | 0.000000003972 |
| Medicago truncatula | chr2 | 5 | CH_mtr_246 | 7 | 10 | 0.00000000000102946 |
| Petunia axillaris | Peaxi162Scf00045 | 5 | CH_pax_664 | 3 | 3 | 0.000461814 |
| Solanum lycopersicum | SL4.0ch05 | 5 | CH_sly_145 | 9 | 33 | 0.00000000000465256 |
| Solanum pennellii | Spenn-ch03 | 5 | CH_spe_473 | 4 | 7 | 0.000014554 |
| Solanum tuberosum | ST4.03ch03 | 5 | CH_stu_282 | 5 | 6 | 0.0000000121375 |
| Trochodendron aralioides | group18 | 5 | CH_tar_316 | 5 | 8 | 0.000000498119 |
| Aethionema arabicum | LG-2 | 6 | CH_aar_191 | 4 | 4 | 0.00000196968 |
| Brassica carinata | ChrB05 | 6 | CH_bca_688 | 7 | 31 | 0.000000561946 |
| Brassica napus | C03 | 6 | CH_bna_188 | 7 | 11 | 0.0000000000435885 |
| Brassica napus | A08 | 6 | CH_bna_27 | 11 | 14 | 2.61731e-21 |
| Brassica oleracea | C3 | 6 | CH_bol_641 | 4 | 7 | 0.000151449 |
| Brassica rapa | A08 | 6 | CH_bra_149 | 5 | 6 | 0.000000078666 |
| Camellia sinensis var. sinensis | Chr10 | 6 | CH_camsi_888 | 4 | 8 | 0.0000318441 |
| Capsicum annuum | PGAv.1.6.scaffold566 | 6 | CH_can_194 | 5 | 5 | 0.000000000908049 |
| Capsicum annuum | PGAv.1.6.scaffold947 | 6 | CH_can_644 | 3 | 3 | 0.000226241 |
| Corylus avellana | 6 | 6 | CH_cav_152 | 7 | 20 | 0.000000000595373 |
| Ceratophyllum demersum | 7 | 6 | CH_cde_49 | 6 | 10 | 0.00000000778384 |
| Davidia involucrata | GWHABJS00000017 | 6 | CH_din_492 | 4 | 8 | 0.0000795321 |
| Davidia involucrata | GWHABJS00000003 | 6 | CH_din_772 | 3 | 3 | 0.000502929 |
| Erigeron canadensis | Conyza_canadensis_scaffold:7 | 6 | CH_eca_452 | 4 | 8 | 0.0000127895 |
| Fragaria vesca | Fvb6 | 6 | CH_fve_223 | 6 | 14 | 0.00000000263255 |
| Helianthus annuus | HanXRQChr07 | 6 | CH_han_327 | 5 | 5 | 0.00000000305477 |
| Magnolia biondii | Chr07 | 6 | CH_mbi_1178 | 3 | 4 | 0.000617461 |
| Magnolia biondii | Chr15 | 6 | CH_mbi_289 | 6 | 16 | 0.000000003972 |
| Medicago truncatula | chr2 | 6 | CH_mtr_246 | 7 | 10 | 0.00000000000102946 |
| Petunia axillaris | Peaxi162Scf00045 | 6 | CH_pax_664 | 3 | 3 | 0.000461814 |
| Solanum lycopersicum | SL4.0ch05 | 6 | CH_sly_145 | 9 | 33 | 0.00000000000465256 |
| Solanum pennellii | Spenn-ch03 | 6 | CH_spe_473 | 4 | 7 | 0.000014554 |
| Solanum tuberosum | ST4.03ch03 | 6 | CH_stu_282 | 5 | 6 | 0.0000000121375 |
| Trochodendron aralioides | group18 | 6 | CH_tar_316 | 5 | 8 | 0.000000498119 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |