Functional clusters
Information
- Type InterPro
- Description Mediator of RNA polymerase II transcription subunit 26a/b-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Camellia sinensis var. sinensis | Chr13 | 5 | CH_camsi_1482 | 2 | 4 | 0.000825322 |
| Capsicum annuum | PGAv.1.6.scaffold243 | 5 | CH_can_800 | 2 | 2 | 0.000495663 |
| Corylus avellana | 10 | 5 | CH_cav_189 | 3 | 3 | 0.00000000881765 |
| Carya illinoinensis | Chr09 | 5 | CH_cil_694 | 2 | 2 | 0.000185948 |
| Erigeron canadensis | Conyza_canadensis_scaffold:4 | 5 | CH_eca_142 | 5 | 24 | 0.000000000325033 |
| Eucalyptus grandis | Chr11 | 5 | CH_egr_662 | 4 | 24 | 0.0000000319242 |
| Glycine max | Gm19 | 5 | CH_gma_763 | 2 | 2 | 0.000227734 |
| Helianthus annuus | HanXRQChr02 | 5 | CH_han_483 | 3 | 3 | 0.000000268794 |
| Petunia axillaris | Peaxi162Scf00003 | 5 | CH_pax_197 | 3 | 6 | 0.000000148487 |
| Quercus lobata | 7 | 5 | CH_qlo_1490 | 2 | 2 | 0.000154887 |
| Sequoiadendron giganteum | chr9 | 5 | CH_sgi_2493 | 2 | 2 | 0.000487151 |
| Sequoiadendron giganteum | chr9 | 5 | CH_sgi_2494 | 2 | 2 | 0.000487151 |
| Vigna mungo | CM024070.1 | 5 | CH_vmu_476 | 2 | 2 | 0.000193842 |
| Vanilla planifolia | CM028154.1 | 5 | CH_vpl_214 | 3 | 6 | 0.00000163744 |
| Camellia sinensis var. sinensis | Chr13 | 6 | CH_camsi_1482 | 2 | 4 | 0.000825322 |
| Capsicum annuum | PGAv.1.6.scaffold243 | 6 | CH_can_800 | 2 | 2 | 0.000495663 |
| Corylus avellana | 10 | 6 | CH_cav_189 | 3 | 3 | 0.00000000881765 |
| Carya illinoinensis | Chr09 | 6 | CH_cil_694 | 2 | 2 | 0.000185948 |
| Erigeron canadensis | Conyza_canadensis_scaffold:4 | 6 | CH_eca_142 | 5 | 24 | 0.000000000325033 |
| Eucalyptus grandis | Chr11 | 6 | CH_egr_662 | 4 | 24 | 0.0000000319242 |
| Glycine max | Gm19 | 6 | CH_gma_763 | 2 | 2 | 0.000227734 |
| Helianthus annuus | HanXRQChr02 | 6 | CH_han_483 | 3 | 3 | 0.000000268794 |
| Petunia axillaris | Peaxi162Scf00003 | 6 | CH_pax_197 | 3 | 6 | 0.000000148487 |
| Quercus lobata | 7 | 6 | CH_qlo_1490 | 2 | 2 | 0.000154887 |
| Sequoiadendron giganteum | chr9 | 6 | CH_sgi_2493 | 2 | 2 | 0.000487151 |
| Sequoiadendron giganteum | chr9 | 6 | CH_sgi_2494 | 2 | 2 | 0.000487151 |
| Vigna mungo | CM024070.1 | 6 | CH_vmu_476 | 2 | 2 | 0.000193842 |
| Vanilla planifolia | CM028154.1 | 6 | CH_vpl_214 | 3 | 6 | 0.00000163744 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |