Functional clusters

Information

  • Type InterPro
  • Description AT1G29970-like

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-8 5 CH_aar_78 4 5 0.0000000000569553
Capsicum annuum PGAv.1.6.scaffold375 5 CH_can_799 2 2 0.000495663
Corylus avellana 4 5 CH_cav_788 2 3 0.000689981
Cardamine hirsuta Chr3 5 CH_chi_803 2 2 0.000691204
Lactuca sativa Lsat_1_v8_lg_5 5 CH_lsa_785 2 2 0.000308404
Magnolia biondii Chr07 5 CH_mbi_253 4 18 0.0000000010513
Rhododendron simsii chr06 5 CH_rsi_79 6 6 2.51857e-20
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_735 2 2 0.000557543
Aethionema arabicum LG-8 6 CH_aar_78 4 5 0.0000000000569553
Capsicum annuum PGAv.1.6.scaffold375 6 CH_can_799 2 2 0.000495663
Corylus avellana 4 6 CH_cav_788 2 3 0.000689981
Cardamine hirsuta Chr3 6 CH_chi_803 2 2 0.000691204
Lactuca sativa Lsat_1_v8_lg_5 6 CH_lsa_785 2 2 0.000308404
Magnolia biondii Chr07 6 CH_mbi_253 4 18 0.0000000010513
Rhododendron simsii chr06 6 CH_rsi_79 6 6 2.51857e-20
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_735 2 2 0.000557543

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001