Functional clusters
Information
- Type InterPro
- Description BTB/POZ domain containing protein At1g01640-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-5 | 5 | CH_aar_75 | 4 | 4 | 0.000000000034176 |
| Arabidopsis lyrata | scaffold_4 | 5 | CH_aly_326 | 3 | 3 | 0.00000237877 |
| Amborella trichopoda | AmTr_v1.0_scaffold00077 | 5 | CH_atr_203 | 3 | 3 | 0.0000000946662 |
| Amborella trichopoda | AmTr_v1.0_scaffold00012 | 5 | CH_atr_668 | 2 | 2 | 0.000794407 |
| Brassica carinata | ChrB06 | 5 | CH_bca_1708 | 4 | 77 | 0.000346757 |
| Brassica carinata | ChrB01 | 5 | CH_bca_779 | 3 | 3 | 0.00000121391 |
| Brassica carinata | ChrC08 | 5 | CH_bca_958 | 3 | 4 | 0.00000485479 |
| Brassica napus | C04 | 5 | CH_bna_1064 | 3 | 8 | 0.000105651 |
| Brassica napus | C03 | 5 | CH_bna_639 | 3 | 3 | 0.00000188841 |
| Brassica napus | A04 | 5 | CH_bna_950 | 3 | 6 | 0.0000377467 |
| Brassica oleracea | C3 | 5 | CH_bol_298 | 3 | 3 | 0.000000458344 |
| Brassica oleracea | C4 | 5 | CH_bol_432 | 3 | 6 | 0.00000916307 |
| Brassica rapa | A04 | 5 | CH_bra_106 | 4 | 5 | 0.00000000282432 |
| Capsicum annuum | PGAv.1.6.scaffold203 | 5 | CH_can_594 | 2 | 2 | 0.0000826105 |
| Corylus avellana | 11 | 5 | CH_cav_116 | 5 | 27 | 0.0000000000208983 |
| Coffea canephora | chr2 | 5 | CH_ccan_363 | 2 | 3 | 0.00003833 |
| Ceratophyllum demersum | 2 | 5 | CH_cde_490 | 2 | 5 | 0.000789702 |
| Carpinus fangiana | Cfa01 | 5 | CH_cfa_322 | 3 | 16 | 0.00000481583 |
| Capsella rubella | scaffold_4 | 5 | CH_cru_308 | 3 | 3 | 0.00000132315 |
| Durio zibethinus | NW_019168492.1 | 5 | CH_dzi_548 | 2 | 2 | 0.000463489 |
| Eutrema salsugineum | scaffold_7 | 5 | CH_esa_253 | 4 | 16 | 0.00000733752 |
| Eutrema salsugineum | scaffold_10 | 5 | CH_esa_26 | 7 | 7 | 4.88954e-19 |
| Gossypium hirsutum | A05 | 5 | CH_ghi_1222 | 2 | 2 | 0.000560733 |
| Gossypium hirsutum | D04 | 5 | CH_ghi_131 | 5 | 5 | 8.00685e-17 |
| Gossypium raimondii | Chr12 | 5 | CH_gra_73 | 5 | 5 | 6.19636e-17 |
| Papaver somniferum | NC_039366.1 | 5 | CH_pso_173 | 5 | 6 | 0.000000000000235891 |
| Papaver somniferum | NC_039368.1 | 5 | CH_pso_356 | 4 | 7 | 0.00000000718292 |
| Papaver somniferum | NW_020627707.1 | 5 | CH_pso_668 | 3 | 4 | 0.00000404981 |
| Papaver somniferum | NC_039365.1 | 5 | CH_pso_721 | 3 | 5 | 0.0000101229 |
| Papaver somniferum | NC_039366.1 | 5 | CH_pso_828 | 3 | 7 | 0.0000354185 |
| Striga asiatica | scaffold60 | 5 | CH_sas_149 | 2 | 2 | 0.0000625371 |
| Sequoiadendron giganteum | chr6 | 5 | CH_sgi_68 | 10 | 13 | 3.44784e-32 |
| Theobroma cacao | Chromosome_10 | 5 | CH_tca_549 | 2 | 2 | 0.0000732386 |
| Tarenaya hassleriana | NW_010966881.1 | 5 | CH_tha_49 | 4 | 4 | 0.0000000000715663 |
| Aethionema arabicum | LG-5 | 6 | CH_aar_75 | 4 | 4 | 0.000000000034176 |
| Arabidopsis lyrata | scaffold_4 | 6 | CH_aly_326 | 3 | 3 | 0.00000237877 |
| Amborella trichopoda | AmTr_v1.0_scaffold00077 | 6 | CH_atr_203 | 3 | 3 | 0.0000000946662 |
| Amborella trichopoda | AmTr_v1.0_scaffold00012 | 6 | CH_atr_668 | 2 | 2 | 0.000794407 |
| Brassica carinata | ChrB06 | 6 | CH_bca_1708 | 4 | 77 | 0.000346757 |
| Brassica carinata | ChrB01 | 6 | CH_bca_779 | 3 | 3 | 0.00000121391 |
| Brassica carinata | ChrC08 | 6 | CH_bca_958 | 3 | 4 | 0.00000485479 |
| Brassica napus | C04 | 6 | CH_bna_1064 | 3 | 8 | 0.000105651 |
| Brassica napus | C03 | 6 | CH_bna_639 | 3 | 3 | 0.00000188841 |
| Brassica napus | A04 | 6 | CH_bna_950 | 3 | 6 | 0.0000377467 |
| Brassica oleracea | C3 | 6 | CH_bol_298 | 3 | 3 | 0.000000458344 |
| Brassica oleracea | C4 | 6 | CH_bol_432 | 3 | 6 | 0.00000916307 |
| Brassica rapa | A04 | 6 | CH_bra_106 | 4 | 5 | 0.00000000282432 |
| Capsicum annuum | PGAv.1.6.scaffold203 | 6 | CH_can_594 | 2 | 2 | 0.0000826105 |
| Corylus avellana | 11 | 6 | CH_cav_116 | 5 | 27 | 0.0000000000208983 |
| Coffea canephora | chr2 | 6 | CH_ccan_363 | 2 | 3 | 0.00003833 |
| Ceratophyllum demersum | 2 | 6 | CH_cde_490 | 2 | 5 | 0.000789702 |
| Carpinus fangiana | Cfa01 | 6 | CH_cfa_322 | 3 | 16 | 0.00000481583 |
| Capsella rubella | scaffold_4 | 6 | CH_cru_308 | 3 | 3 | 0.00000132315 |
| Durio zibethinus | NW_019168492.1 | 6 | CH_dzi_548 | 2 | 2 | 0.000463489 |
| Eutrema salsugineum | scaffold_7 | 6 | CH_esa_253 | 4 | 16 | 0.00000733752 |
| Eutrema salsugineum | scaffold_10 | 6 | CH_esa_26 | 7 | 7 | 4.88954e-19 |
| Fragaria x ananassa | Fvb7-4 | 6 | CH_fan_1025 | 2 | 2 | 0.000388576 |
| Fragaria x ananassa | Fvb7-2 | 6 | CH_fan_1026 | 2 | 2 | 0.000388576 |
| Fragaria x ananassa | Fvb7-1 | 6 | CH_fan_1027 | 2 | 2 | 0.000388576 |
| Gossypium hirsutum | A05 | 6 | CH_ghi_1222 | 2 | 2 | 0.000560733 |
| Gossypium hirsutum | D04 | 6 | CH_ghi_131 | 5 | 5 | 8.00685e-17 |
| Gossypium raimondii | Chr12 | 6 | CH_gra_73 | 5 | 5 | 6.19636e-17 |
| Papaver somniferum | NC_039366.1 | 6 | CH_pso_173 | 5 | 6 | 0.000000000000235891 |
| Papaver somniferum | NC_039368.1 | 6 | CH_pso_356 | 4 | 7 | 0.00000000718292 |
| Papaver somniferum | NW_020627707.1 | 6 | CH_pso_668 | 3 | 4 | 0.00000404981 |
| Papaver somniferum | NC_039365.1 | 6 | CH_pso_721 | 3 | 5 | 0.0000101229 |
| Papaver somniferum | NC_039366.1 | 6 | CH_pso_828 | 3 | 7 | 0.0000354185 |
| Striga asiatica | scaffold60 | 6 | CH_sas_149 | 2 | 2 | 0.0000625371 |
| Sequoiadendron giganteum | chr6 | 6 | CH_sgi_68 | 10 | 13 | 3.44784e-32 |
| Theobroma cacao | Chromosome_10 | 6 | CH_tca_549 | 2 | 2 | 0.0000732386 |
| Tarenaya hassleriana | NW_010966881.1 | 6 | CH_tha_49 | 4 | 4 | 0.0000000000715663 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |