Functional clusters
Information
- Type InterPro
- Description UNC93-like protein 3, plant
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amborella trichopoda | AmTr_v1.0_scaffold00012 | 5 | CH_atr_545 | 2 | 4 | 0.000476607 |
| Brassica carinata | ChrC05 | 5 | CH_bca_1277 | 2 | 3 | 0.0000641286 |
| Cardamine hirsuta | Chr3 | 5 | CH_chi_469 | 2 | 2 | 0.0000691204 |
| Fragaria vesca | Fvb6 | 5 | CH_fve_538 | 2 | 2 | 0.0000589102 |
| Lotus japonicus | chr1 | 5 | CH_lja_139 | 3 | 4 | 0.0000000306801 |
| Malus domestica | Chr04 | 5 | CH_mdo_1079 | 2 | 2 | 0.000227527 |
| Medicago truncatula | chr7 | 5 | CH_mtr_483 | 3 | 5 | 0.0000000253208 |
| Olea europaea | scaffold309 | 5 | CH_oeu_581 | 2 | 3 | 0.000480389 |
| Oryza sativa ssp. japonica | chr12 | 5 | CH_osa_195 | 3 | 3 | 0.00000000418381 |
| Punica granatum | NC_045131.1 | 5 | CH_pgr_468 | 2 | 3 | 0.000225098 |
| Prunus persica | Pp06 | 5 | CH_ppe_580 | 2 | 2 | 0.0000745962 |
| Papaver somniferum | NC_039366.1 | 5 | CH_pso_696 | 3 | 24 | 0.00000616148 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 5 | CH_rch_959 | 2 | 2 | 0.0000398653 |
| Trifolium pratense | Tp57577_TGAC_v2_LG6 | 5 | CH_tpr_571 | 2 | 3 | 0.000227083 |
| Amborella trichopoda | AmTr_v1.0_scaffold00012 | 6 | CH_atr_545 | 2 | 4 | 0.000476607 |
| Brassica carinata | ChrC05 | 6 | CH_bca_1277 | 2 | 3 | 0.0000641286 |
| Cardamine hirsuta | Chr3 | 6 | CH_chi_469 | 2 | 2 | 0.0000691204 |
| Fragaria x ananassa | Fvb6-2 | 6 | CH_fan_515 | 3 | 13 | 0.0000029368 |
| Fragaria vesca | Fvb6 | 6 | CH_fve_538 | 2 | 2 | 0.0000589102 |
| Lotus japonicus | chr1 | 6 | CH_lja_139 | 3 | 4 | 0.0000000306801 |
| Malus domestica | Chr04 | 6 | CH_mdo_1079 | 2 | 2 | 0.000227527 |
| Medicago truncatula | chr7 | 6 | CH_mtr_483 | 3 | 5 | 0.0000000253208 |
| Olea europaea | scaffold309 | 6 | CH_oeu_581 | 2 | 3 | 0.000480389 |
| Oryza sativa ssp. japonica | chr12 | 6 | CH_osa_195 | 3 | 3 | 0.00000000418381 |
| Punica granatum | NC_045131.1 | 6 | CH_pgr_468 | 2 | 3 | 0.000225098 |
| Prunus persica | Pp06 | 6 | CH_ppe_580 | 2 | 2 | 0.0000745962 |
| Papaver somniferum | NC_039366.1 | 6 | CH_pso_696 | 3 | 24 | 0.00000616148 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 6 | CH_rch_959 | 2 | 2 | 0.0000398653 |
| Trifolium pratense | Tp57577_TGAC_v2_LG6 | 6 | CH_tpr_571 | 2 | 3 | 0.000227083 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |