Functional clusters
Information
- Type InterPro
- Description Ribonuclease H-like domain, plant type
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aquilegia oxysepala | CHR02 | 5 | CH_aox_570 | 9 | 59 | 0.000914556 |
| Lotus japonicus | chr6 | 5 | CH_lja_426 | 4 | 6 | 0.0000844161 |
| Magnolia biondii | Chr15 | 5 | CH_mbi_365 | 12 | 32 | 0.0000000456192 |
| Papaver somniferum | NC_039364.1 | 5 | CH_pso_634 | 13 | 73 | 0.00000265886 |
| Striga asiatica | scaffold7 | 5 | CH_sas_117 | 3 | 5 | 0.0000328304 |
| Salix brachista | GWHAAZH00000017 | 5 | CH_sbr_170 | 4 | 4 | 0.00000000136629 |
| Simmondsia chinensis | GWHAASQ00000014 | 5 | CH_sci_206 | 4 | 10 | 0.00000411453 |
| Sapria himalayana | scaffold92_1596972 | 5 | CH_shi_181 | 7 | 29 | 0.000000583843 |
| Sapria himalayana | scaffold63_2876970 | 5 | CH_shi_191 | 9 | 79 | 0.000000886333 |
| Sapria himalayana | scaffold20_10339243 | 5 | CH_shi_232 | 8 | 80 | 0.0000339201 |
| Sapria himalayana | scaffold83_1810967 | 5 | CH_shi_234 | 4 | 5 | 0.0000381209 |
| Solanum pennellii | Spenn-ch11 | 5 | CH_spe_111 | 8 | 30 | 0.0000000000267813 |
| Aquilegia oxysepala | CHR02 | 6 | CH_aox_570 | 9 | 59 | 0.000914556 |
| Lotus japonicus | chr6 | 6 | CH_lja_426 | 4 | 6 | 0.0000844161 |
| Magnolia biondii | Chr15 | 6 | CH_mbi_365 | 12 | 32 | 0.0000000456192 |
| Papaver somniferum | NC_039364.1 | 6 | CH_pso_634 | 13 | 73 | 0.00000265886 |
| Striga asiatica | scaffold7 | 6 | CH_sas_117 | 3 | 5 | 0.0000328304 |
| Salix brachista | GWHAAZH00000017 | 6 | CH_sbr_170 | 4 | 4 | 0.00000000136629 |
| Simmondsia chinensis | GWHAASQ00000014 | 6 | CH_sci_206 | 4 | 10 | 0.00000411453 |
| Sapria himalayana | scaffold92_1596972 | 6 | CH_shi_181 | 7 | 29 | 0.000000583843 |
| Sapria himalayana | scaffold63_2876970 | 6 | CH_shi_191 | 9 | 79 | 0.000000886333 |
| Sapria himalayana | scaffold20_10339243 | 6 | CH_shi_232 | 8 | 80 | 0.0000339201 |
| Sapria himalayana | scaffold83_1810967 | 6 | CH_shi_234 | 4 | 5 | 0.0000381209 |
| Solanum pennellii | Spenn-ch11 | 6 | CH_spe_111 | 8 | 30 | 0.0000000000267813 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |