Functional clusters
Information
- Type InterPro
- Description Egg cell-secreted protein 1.1/1.5
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr13 | 5 | CH_acertr_800 | 2 | 2 | 0.000211491 |
| Carica papaya | supercontig_49 | 5 | CH_cpa_411 | 2 | 2 | 0.0000950661 |
| Erythranthe guttata | scaffold_3 | 5 | CH_egut_610 | 2 | 2 | 0.000218444 |
| Fragaria vesca | Fvb2 | 5 | CH_fve_669 | 3 | 24 | 0.000210306 |
| Helianthus annuus | HanXRQChr02 | 5 | CH_han_1139 | 2 | 2 | 0.000579643 |
| Lonicera japonica | GWHAAZE00000002 | 5 | CH_lonja_404 | 4 | 24 | 0.000000034201 |
| Medicago truncatula | chr3 | 5 | CH_mtr_1196 | 2 | 2 | 0.000246518 |
| Prunus persica | Pp08 | 5 | CH_ppe_353 | 4 | 30 | 0.000000170358 |
| Papaver somniferum | NC_039361.1 | 5 | CH_pso_1239 | 3 | 17 | 0.000687008 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 5 | CH_rch_1256 | 2 | 2 | 0.000239192 |
| Salix brachista | GWHAAZH00000003 | 5 | CH_sbr_49 | 7 | 13 | 2.79086e-18 |
| Sechium edule | LG11 | 5 | CH_sed_134 | 3 | 3 | 0.0000000305391 |
| Trochodendron aralioides | group11 | 5 | CH_tar_148 | 4 | 17 | 0.0000000015446 |
| Theobroma cacao | Chromosome_8 | 5 | CH_tca_634 | 2 | 2 | 0.000219716 |
| Tarenaya hassleriana | NW_010965372.1 | 5 | CH_tha_202 | 2 | 2 | 0.000069847 |
| Acer truncatum | chr13 | 6 | CH_acertr_800 | 2 | 2 | 0.000211491 |
| Carica papaya | supercontig_49 | 6 | CH_cpa_411 | 2 | 2 | 0.0000950661 |
| Erythranthe guttata | scaffold_3 | 6 | CH_egut_610 | 2 | 2 | 0.000218444 |
| Fragaria x ananassa | Fvb2-1 | 6 | CH_fan_824 | 3 | 17 | 0.0000997712 |
| Fragaria vesca | Fvb2 | 6 | CH_fve_669 | 3 | 24 | 0.000210306 |
| Helianthus annuus | HanXRQChr02 | 6 | CH_han_1139 | 2 | 2 | 0.000579643 |
| Lonicera japonica | GWHAAZE00000002 | 6 | CH_lonja_404 | 4 | 24 | 0.000000034201 |
| Medicago truncatula | chr3 | 6 | CH_mtr_1196 | 2 | 2 | 0.000246518 |
| Prunus persica | Pp08 | 6 | CH_ppe_353 | 4 | 30 | 0.000000170358 |
| Papaver somniferum | NC_039361.1 | 6 | CH_pso_1239 | 3 | 17 | 0.000687008 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 6 | CH_rch_1256 | 2 | 2 | 0.000239192 |
| Salix brachista | GWHAAZH00000003 | 6 | CH_sbr_49 | 7 | 13 | 2.79086e-18 |
| Sechium edule | LG11 | 6 | CH_sed_134 | 3 | 3 | 0.0000000305391 |
| Trochodendron aralioides | group11 | 6 | CH_tar_148 | 4 | 17 | 0.0000000015446 |
| Theobroma cacao | Chromosome_8 | 6 | CH_tca_634 | 2 | 2 | 0.000219716 |
| Tarenaya hassleriana | NW_010965372.1 | 6 | CH_tha_202 | 2 | 2 | 0.000069847 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |