Functional clusters
Information
- Type InterPro
- Description PIP2/PIPL1
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Camellia sinensis var. sinensis | Chr3 | 5 | CH_camsi_1502 | 2 | 3 | 0.000825341 |
| Corylus avellana | 9 | 5 | CH_cav_747 | 2 | 2 | 0.000460017 |
| Davidia involucrata | GWHABJS00000011 | 5 | CH_din_235 | 3 | 4 | 0.0000000600289 |
| Eucalyptus grandis | Chr08 | 5 | CH_egr_43 | 11 | 12 | 3.01494e-34 |
| Eucalyptus grandis | Chr08 | 5 | CH_egr_874 | 3 | 3 | 0.00000233795 |
| Lupinus albus | Lalb_Chr06 | 5 | CH_lal_792 | 2 | 2 | 0.000787236 |
| Lotus japonicus | chr4 | 5 | CH_lja_480 | 2 | 2 | 0.000214523 |
| Medicago truncatula | chr1 | 5 | CH_mtr_248 | 4 | 4 | 0.00000000000104042 |
| Nelumbo nucifera | chr1 | 5 | CH_nnu_82 | 4 | 6 | 0.0000000000251456 |
| Olea europaea | chr18 | 5 | CH_oeu_150 | 3 | 5 | 0.000000170947 |
| Petunia axillaris | Peaxi162Scf00365 | 5 | CH_pax_76 | 4 | 6 | 0.000000000015672 |
| Pisum sativum | chr6LG2 | 5 | CH_psa_63 | 5 | 8 | 0.0000000000000186583 |
| Quercus lobata | 6 | 5 | CH_qlo_1612 | 2 | 2 | 0.000309773 |
| Solanum pennellii | Spenn-ch03 | 5 | CH_spe_742 | 2 | 2 | 0.000266874 |
| Solanum tuberosum | ST4.03ch03 | 5 | CH_stu_324 | 3 | 3 | 0.0000000393922 |
| Trochodendron aralioides | group14 | 5 | CH_tar_48 | 5 | 5 | 5.8473e-16 |
| Tarenaya hassleriana | NW_010963495.1 | 5 | CH_tha_324 | 2 | 3 | 0.000628587 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_82 | 5 | CH_tpr_163 | 3 | 3 | 0.00000000859546 |
| Camellia sinensis var. sinensis | Chr3 | 6 | CH_camsi_1502 | 2 | 3 | 0.000825341 |
| Corylus avellana | 9 | 6 | CH_cav_747 | 2 | 2 | 0.000460017 |
| Davidia involucrata | GWHABJS00000011 | 6 | CH_din_235 | 3 | 4 | 0.0000000600289 |
| Eucalyptus grandis | Chr08 | 6 | CH_egr_43 | 11 | 12 | 3.01494e-34 |
| Eucalyptus grandis | Chr08 | 6 | CH_egr_874 | 3 | 3 | 0.00000233795 |
| Lupinus albus | Lalb_Chr06 | 6 | CH_lal_792 | 2 | 2 | 0.000787236 |
| Lotus japonicus | chr4 | 6 | CH_lja_480 | 2 | 2 | 0.000214523 |
| Medicago truncatula | chr1 | 6 | CH_mtr_248 | 4 | 4 | 0.00000000000104042 |
| Nelumbo nucifera | chr1 | 6 | CH_nnu_82 | 4 | 6 | 0.0000000000251456 |
| Olea europaea | chr18 | 6 | CH_oeu_150 | 3 | 5 | 0.000000170947 |
| Petunia axillaris | Peaxi162Scf00365 | 6 | CH_pax_76 | 4 | 6 | 0.000000000015672 |
| Pisum sativum | chr6LG2 | 6 | CH_psa_63 | 5 | 8 | 0.0000000000000186583 |
| Quercus lobata | 6 | 6 | CH_qlo_1612 | 2 | 2 | 0.000309773 |
| Solanum pennellii | Spenn-ch03 | 6 | CH_spe_742 | 2 | 2 | 0.000266874 |
| Solanum tuberosum | ST4.03ch03 | 6 | CH_stu_324 | 3 | 3 | 0.0000000393922 |
| Trochodendron aralioides | group14 | 6 | CH_tar_48 | 5 | 5 | 5.8473e-16 |
| Tarenaya hassleriana | NW_010963495.1 | 6 | CH_tha_324 | 2 | 3 | 0.000628587 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_82 | 6 | CH_tpr_163 | 3 | 3 | 0.00000000859546 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |