Functional clusters

Information

  • Type InterPro
  • Description Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6-like

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr9 5 CH_acertr_244 3 3 0.00000002982
Actinidia chinensis Lachesis_group7 5 CH_ach_400 2 2 0.000162964
Avicennia marina ScioBoG_102833_HRSCAF_103052 5 CH_ama_178 2 2 0.000258665
Camellia sinensis var. sinensis Chr15 5 CH_camsi_1105 2 2 0.000137564
Gossypium hirsutum A05 5 CH_ghi_1064 2 2 0.000267016
Hydrangea macrophylla Hma1.2p1_0493F.1 5 CH_hma_476 2 2 0.000111086
Simmondsia chinensis GWHAASQ00000004 5 CH_sci_256 3 15 0.0000494152
Simmondsia chinensis GWHAASQ00000002 5 CH_sci_543 2 2 0.000851426
Sequoiadendron giganteum chr11 5 CH_sgi_345 5 6 0.00000000000000532259
Trochodendron aralioides group0 5 CH_tar_233 3 3 0.0000000540676
Acer truncatum chr9 6 CH_acertr_244 3 3 0.00000002982
Actinidia chinensis Lachesis_group7 6 CH_ach_400 2 2 0.000162964
Avicennia marina ScioBoG_102833_HRSCAF_103052 6 CH_ama_178 2 2 0.000258665
Camellia sinensis var. sinensis Chr15 6 CH_camsi_1105 2 2 0.000137564
Gossypium hirsutum A05 6 CH_ghi_1064 2 2 0.000267016
Hydrangea macrophylla Hma1.2p1_0493F.1 6 CH_hma_476 2 2 0.000111086
Simmondsia chinensis GWHAASQ00000004 6 CH_sci_256 3 15 0.0000494152
Simmondsia chinensis GWHAASQ00000002 6 CH_sci_543 2 2 0.000851426
Sequoiadendron giganteum chr11 6 CH_sgi_345 5 6 0.00000000000000532259
Trochodendron aralioides group0 6 CH_tar_233 3 3 0.0000000540676

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001