Functional clusters
Information
- Type InterPro
- Description Protein DCL-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amborella trichopoda | AmTr_v1.0_scaffold00091 | 5 | CH_atr_598 | 2 | 2 | 0.000476644 |
| Beta vulgaris | Scaffold_0007 | 5 | CH_bvu_487 | 2 | 2 | 0.00049675 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4044 | 5 | CH_cqu_1018 | 2 | 2 | 0.000710732 |
| Fragaria vesca | Fvb2 | 5 | CH_fve_814 | 3 | 64 | 0.000864846 |
| Hydrangea macrophylla | Hma1.2p1_0360F.1 | 5 | CH_hma_128 | 3 | 3 | 0.0000000740453 |
| Lotus japonicus | chr1 | 5 | CH_lja_197 | 3 | 3 | 0.000000153406 |
| Sequoiadendron giganteum | chr10 | 5 | CH_sgi_2639 | 2 | 3 | 0.000876823 |
| Zea mays | 1 | 5 | CH_zma_529 | 2 | 2 | 0.000766969 |
| Amborella trichopoda | AmTr_v1.0_scaffold00091 | 6 | CH_atr_598 | 2 | 2 | 0.000476644 |
| Beta vulgaris | Scaffold_0007 | 6 | CH_bvu_487 | 2 | 2 | 0.00049675 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4044 | 6 | CH_cqu_1018 | 2 | 2 | 0.000710732 |
| Fragaria vesca | Fvb2 | 6 | CH_fve_814 | 3 | 64 | 0.000864846 |
| Hydrangea macrophylla | Hma1.2p1_0360F.1 | 6 | CH_hma_128 | 3 | 3 | 0.0000000740453 |
| Lotus japonicus | chr1 | 6 | CH_lja_197 | 3 | 3 | 0.000000153406 |
| Sequoiadendron giganteum | chr10 | 6 | CH_sgi_2639 | 2 | 3 | 0.000876823 |
| Zea mays | 1 | 6 | CH_zma_529 | 2 | 2 | 0.000766969 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |