Functional clusters
Information
- Type InterPro
- Description Cyclophilin-type peptidyl-prolyl cis-trans isomerase, E. coli cyclophilin A-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica napus | A09 | 5 | CH_bna_1445 | 2 | 2 | 0.00066822 |
| Brassica napus | A02 | 5 | CH_bna_865 | 3 | 15 | 0.0000197403 |
| Brassica oleracea | C9 | 5 | CH_bol_795 | 2 | 2 | 0.000490292 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 5 | CH_rch_185 | 5 | 11 | 0.00000000000000875148 |
| Vanilla planifolia | CM028159.1 | 5 | CH_vpl_207 | 3 | 11 | 0.00000135086 |
| Brassica napus | A09 | 6 | CH_bna_1445 | 2 | 2 | 0.00066822 |
| Brassica napus | A02 | 6 | CH_bna_865 | 3 | 15 | 0.0000197403 |
| Brassica oleracea | C9 | 6 | CH_bol_795 | 2 | 2 | 0.000490292 |
| Fragaria x ananassa | Fvb6-1 | 6 | CH_fan_741 | 3 | 37 | 0.0000398738 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 6 | CH_rch_185 | 5 | 11 | 0.00000000000000875148 |
| Vanilla planifolia | CM028159.1 | 6 | CH_vpl_207 | 3 | 11 | 0.00000135086 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |