Functional clusters

Information

  • Type InterPro
  • Description Pentatricopeptide repeat-containing protein NFD5-like

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00011 5 CH_atr_614 2 3 0.000714919
Camellia sinensis var. sinensis Chr6 5 CH_camsi_1363 2 2 0.000458547
Ceratophyllum demersum 9 5 CH_cde_538 2 2 0.000789796
Daucus carota DCARv2_Chr5 5 CH_dca_632 2 2 0.000382665
Durio zibethinus NW_019168270.1 5 CH_dzi_291 3 13 0.00000368493
Erigeron canadensis Conyza_canadensis_scaffold:3 5 CH_eca_841 2 4 0.00080764
Magnolia biondii Chr17 5 CH_mbi_1277 2 3 0.00087414
Malus domestica Chr11 5 CH_mdo_1133 2 2 0.000227527
Medicago truncatula chr7 5 CH_mtr_1194 2 2 0.000246518
Medicago truncatula chr1 5 CH_mtr_1195 2 2 0.000246518
Physcomitrium patens Chr10 5 CH_ppa_184 2 2 0.0000612726
Sequoiadendron giganteum chr10 5 CH_sgi_2334 2 2 0.000292291
Solanum lycopersicum SL4.0ch07 5 CH_sly_295 3 4 0.000000082678
Solanum pennellii Spenn-ch07 5 CH_spe_873 2 4 0.000800563
Trochodendron aralioides group3 5 CH_tar_719 2 2 0.00018011
Utricularia gibba unitig_8 5 CH_ugi_43 3 3 0.0000000403928
Vanilla planifolia CM028160.1 5 CH_vpl_562 2 2 0.000221664
Amborella trichopoda AmTr_v1.0_scaffold00011 6 CH_atr_614 2 3 0.000714919
Camellia sinensis var. sinensis Chr6 6 CH_camsi_1363 2 2 0.000458547
Ceratophyllum demersum 9 6 CH_cde_538 2 2 0.000789796
Daucus carota DCARv2_Chr5 6 CH_dca_632 2 2 0.000382665
Durio zibethinus NW_019168270.1 6 CH_dzi_291 3 13 0.00000368493
Erigeron canadensis Conyza_canadensis_scaffold:3 6 CH_eca_841 2 4 0.00080764
Magnolia biondii Chr17 6 CH_mbi_1277 2 3 0.00087414
Malus domestica Chr11 6 CH_mdo_1133 2 2 0.000227527
Medicago truncatula chr7 6 CH_mtr_1194 2 2 0.000246518
Medicago truncatula chr1 6 CH_mtr_1195 2 2 0.000246518
Physcomitrium patens Chr10 6 CH_ppa_184 2 2 0.0000612726
Sequoiadendron giganteum chr10 6 CH_sgi_2334 2 2 0.000292291
Solanum lycopersicum SL4.0ch07 6 CH_sly_295 3 4 0.000000082678
Solanum pennellii Spenn-ch07 6 CH_spe_873 2 4 0.000800563
Trochodendron aralioides group3 6 CH_tar_719 2 2 0.00018011
Utricularia gibba unitig_8 6 CH_ugi_43 3 3 0.0000000403928
Vanilla planifolia CM028160.1 6 CH_vpl_562 2 2 0.000221664

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001