Functional clusters
Information
- Type InterPro
- Description Heat shock protein HSP14.7/HSP23.5/HSP23.6-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-9 | 5 | CH_aar_405 | 2 | 2 | 0.000547395 |
| Acer truncatum | chr1 | 5 | CH_acertr_797 | 2 | 2 | 0.000211491 |
| Actinidia chinensis | Lachesis_group23 | 5 | CH_ach_96 | 3 | 4 | 0.0000000708177 |
| Arabidopsis lyrata | scaffold_8 | 5 | CH_aly_293 | 3 | 3 | 0.00000107829 |
| Arabidopsis lyrata | scaffold_7 | 5 | CH_aly_77 | 5 | 6 | 0.00000000000039459 |
| Avicennia marina | ScioBoG_8578_HRSCAF_8617 | 5 | CH_ama_210 | 2 | 2 | 0.000517331 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_4 | 5 | CH_amhyb_109 | 3 | 4 | 0.000000170045 |
| Aquilegia oxysepala | CHR05 | 5 | CH_aox_25 | 5 | 6 | 0.00000000000000186197 |
| Arabidopsis thaliana | Chr4 | 5 | CH_ath_50 | 5 | 6 | 0.00000000000000763955 |
| Brassica carinata | ChrC06 | 5 | CH_bca_108 | 7 | 20 | 0.0000000000000892851 |
| Brassica carinata | ChrC06 | 5 | CH_bca_1261 | 5 | 71 | 0.0000568472 |
| Brassica carinata | ChrC03 | 5 | CH_bca_1336 | 3 | 4 | 0.0000642016 |
| Brassica carinata | ChrC09 | 5 | CH_bca_199 | 5 | 6 | 0.0000000000269541 |
| Brassica carinata | Contig74 | 5 | CH_bca_553 | 4 | 6 | 0.000000128608 |
| Brassica carinata | Contig971 | 5 | CH_bca_554 | 4 | 6 | 0.000000128608 |
| Brassica carinata | ChrC06 | 5 | CH_bca_82 | 8 | 29 | 0.00000000000000242227 |
| Brassica napus | A03 | 5 | CH_bna_146 | 5 | 5 | 0.00000000000255498 |
| Brassica napus | C07 | 5 | CH_bna_235 | 6 | 27 | 0.000000000334227 |
| Brassica napus | C07 | 5 | CH_bna_281 | 7 | 77 | 0.00000000116238 |
| Brassica napus | A02 | 5 | CH_bna_439 | 4 | 6 | 0.0000000842091 |
| Brassica napus | A06 | 5 | CH_bna_757 | 5 | 52 | 0.00000652256 |
| Brassica napus | C02 | 5 | CH_bna_819 | 3 | 3 | 0.0000121067 |
| Brassica oleracea | C7 | 5 | CH_bol_415 | 3 | 3 | 0.00000650657 |
| Brassica oleracea | C2 | 5 | CH_bol_499 | 3 | 4 | 0.0000260172 |
| Brassica oleracea | C4 | 5 | CH_bol_500 | 3 | 4 | 0.0000260172 |
| Brassica oleracea | C7 | 5 | CH_bol_93 | 5 | 6 | 0.00000000000731793 |
| Brassica rapa | A02 | 5 | CH_bra_117 | 4 | 5 | 0.00000000574921 |
| Brassica rapa | A03 | 5 | CH_bra_118 | 4 | 5 | 0.00000000574921 |
| Brassica rapa | A06 | 5 | CH_bra_197 | 5 | 49 | 0.000000743778 |
| Capsicum annuum | PGAv.1.6.scaffold1218 | 5 | CH_can_726 | 2 | 2 | 0.000247831 |
| Coffea canephora | chr8 | 5 | CH_ccan_77 | 4 | 43 | 0.000000000142599 |
| Citrus clementina | scaffold_9 | 5 | CH_ccl_662 | 2 | 2 | 0.000246093 |
| Cardamine hirsuta | Chr7 | 5 | CH_chi_238 | 4 | 7 | 0.0000000472874 |
| Cardamine hirsuta | Chr6 | 5 | CH_chi_96 | 5 | 5 | 0.000000000000514201 |
| Capsella rubella | scaffold_7 | 5 | CH_cru_55 | 6 | 7 | 6.91248e-17 |
| Cucumis sativus L. | chr3 | 5 | CH_csa_351 | 2 | 2 | 0.0000834759 |
| Daucus carota | DCARv2_Chr8 | 5 | CH_dca_443 | 2 | 2 | 0.0000637775 |
| Davidia involucrata | GWHABJS00000003 | 5 | CH_din_27 | 7 | 7 | 9.76361e-22 |
| Erythranthe guttata | scaffold_3 | 5 | CH_egut_177 | 4 | 5 | 0.000000000405347 |
| Eutrema salsugineum | scaffold_1 | 5 | CH_esa_105 | 4 | 4 | 0.000000000166936 |
| Hydrangea macrophylla | Hma1.2p1_1132F.1 | 5 | CH_hma_597 | 2 | 2 | 0.000333259 |
| Lonicera japonica | GWHAAZE00000008 | 5 | CH_lonja_391 | 3 | 3 | 0.0000000215197 |
| Nicotiana tabacum | Nitab4.5_0000312 | 5 | CH_nta_231 | 2 | 2 | 0.000109727 |
| Populus trichocarpa | Chr03 | 5 | CH_ptr_760 | 2 | 2 | 0.000578001 |
| Phaseolus vulgaris | Chr11 | 5 | CH_pvu_474 | 2 | 2 | 0.0000734727 |
| Quercus lobata | 12 | 5 | CH_qlo_371 | 4 | 4 | 0.000000000000412889 |
| Rhododendron simsii | chr03 | 5 | CH_rsi_191 | 5 | 10 | 0.00000000000183465 |
| Sechium edule | LG04 | 5 | CH_sed_333 | 2 | 2 | 0.0000713419 |
| Solanum lycopersicum | SL4.0ch08 | 5 | CH_sly_234 | 3 | 3 | 0.00000000516764 |
| Schrenkiella parvula | ch7-4 | 5 | CH_spa_22 | 5 | 5 | 0.0000000000000161436 |
| Solanum pennellii | Spenn-ch08 | 5 | CH_spe_573 | 2 | 2 | 0.000044479 |
| Solanum tuberosum | ST4.03ch08 | 5 | CH_stu_255 | 3 | 3 | 0.00000000393922 |
| Trochodendron aralioides | group15 | 5 | CH_tar_548 | 2 | 2 | 0.0000600366 |
| Theobroma cacao | Chromosome_3 | 5 | CH_tca_309 | 3 | 4 | 0.00000012873 |
| Vitis vinifera | chr2 | 5 | CH_vvi_630 | 2 | 2 | 0.000228189 |
| Aethionema arabicum | LG-9 | 6 | CH_aar_405 | 2 | 2 | 0.000547395 |
| Acer truncatum | chr1 | 6 | CH_acertr_797 | 2 | 2 | 0.000211491 |
| Actinidia chinensis | Lachesis_group23 | 6 | CH_ach_96 | 3 | 4 | 0.0000000708177 |
| Arabidopsis lyrata | scaffold_8 | 6 | CH_aly_293 | 3 | 3 | 0.00000107829 |
| Arabidopsis lyrata | scaffold_7 | 6 | CH_aly_77 | 5 | 6 | 0.00000000000039459 |
| Avicennia marina | ScioBoG_8578_HRSCAF_8617 | 6 | CH_ama_210 | 2 | 2 | 0.000517331 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_4 | 6 | CH_amhyb_109 | 3 | 4 | 0.000000170045 |
| Aquilegia oxysepala | CHR05 | 6 | CH_aox_25 | 5 | 6 | 0.00000000000000186197 |
| Arabidopsis thaliana | Chr4 | 6 | CH_ath_50 | 5 | 6 | 0.00000000000000763955 |
| Brassica carinata | ChrC06 | 6 | CH_bca_108 | 7 | 20 | 0.0000000000000892851 |
| Brassica carinata | ChrC06 | 6 | CH_bca_1261 | 5 | 71 | 0.0000568472 |
| Brassica carinata | ChrC03 | 6 | CH_bca_1336 | 3 | 4 | 0.0000642016 |
| Brassica carinata | ChrC09 | 6 | CH_bca_199 | 5 | 6 | 0.0000000000269541 |
| Brassica carinata | Contig74 | 6 | CH_bca_553 | 4 | 6 | 0.000000128608 |
| Brassica carinata | Contig971 | 6 | CH_bca_554 | 4 | 6 | 0.000000128608 |
| Brassica carinata | ChrC06 | 6 | CH_bca_82 | 8 | 29 | 0.00000000000000242227 |
| Brassica napus | A03 | 6 | CH_bna_146 | 5 | 5 | 0.00000000000255498 |
| Brassica napus | C07 | 6 | CH_bna_235 | 6 | 27 | 0.000000000334227 |
| Brassica napus | C07 | 6 | CH_bna_281 | 7 | 77 | 0.00000000116238 |
| Brassica napus | A02 | 6 | CH_bna_439 | 4 | 6 | 0.0000000842091 |
| Brassica napus | A06 | 6 | CH_bna_757 | 5 | 52 | 0.00000652256 |
| Brassica napus | C02 | 6 | CH_bna_819 | 3 | 3 | 0.0000121067 |
| Brassica oleracea | C7 | 6 | CH_bol_415 | 3 | 3 | 0.00000650657 |
| Brassica oleracea | C2 | 6 | CH_bol_499 | 3 | 4 | 0.0000260172 |
| Brassica oleracea | C4 | 6 | CH_bol_500 | 3 | 4 | 0.0000260172 |
| Brassica oleracea | C7 | 6 | CH_bol_93 | 5 | 6 | 0.00000000000731793 |
| Brassica rapa | A02 | 6 | CH_bra_117 | 4 | 5 | 0.00000000574921 |
| Brassica rapa | A03 | 6 | CH_bra_118 | 4 | 5 | 0.00000000574921 |
| Brassica rapa | A06 | 6 | CH_bra_197 | 5 | 49 | 0.000000743778 |
| Capsicum annuum | PGAv.1.6.scaffold1218 | 6 | CH_can_726 | 2 | 2 | 0.000247831 |
| Coffea canephora | chr8 | 6 | CH_ccan_77 | 4 | 43 | 0.000000000142599 |
| Citrus clementina | scaffold_9 | 6 | CH_ccl_662 | 2 | 2 | 0.000246093 |
| Cardamine hirsuta | Chr7 | 6 | CH_chi_238 | 4 | 7 | 0.0000000472874 |
| Cardamine hirsuta | Chr6 | 6 | CH_chi_96 | 5 | 5 | 0.000000000000514201 |
| Cucumis melo | chr06 | 6 | CH_cme_317 | 2 | 2 | 0.0000667111 |
| Capsella rubella | scaffold_7 | 6 | CH_cru_55 | 6 | 7 | 6.91248e-17 |
| Cucumis sativus L. | chr3 | 6 | CH_csa_351 | 2 | 2 | 0.0000834759 |
| Daucus carota | DCARv2_Chr8 | 6 | CH_dca_443 | 2 | 2 | 0.0000637775 |
| Davidia involucrata | GWHABJS00000003 | 6 | CH_din_27 | 7 | 7 | 9.76361e-22 |
| Erythranthe guttata | scaffold_3 | 6 | CH_egut_177 | 4 | 5 | 0.000000000405347 |
| Eutrema salsugineum | scaffold_1 | 6 | CH_esa_105 | 4 | 4 | 0.000000000166936 |
| Hydrangea macrophylla | Hma1.2p1_1132F.1 | 6 | CH_hma_597 | 2 | 2 | 0.000333259 |
| Lonicera japonica | GWHAAZE00000008 | 6 | CH_lonja_391 | 3 | 3 | 0.0000000215197 |
| Nicotiana tabacum | Nitab4.5_0000312 | 6 | CH_nta_231 | 2 | 2 | 0.000109727 |
| Populus trichocarpa | Chr03 | 6 | CH_ptr_760 | 2 | 2 | 0.000578001 |
| Phaseolus vulgaris | Chr11 | 6 | CH_pvu_474 | 2 | 2 | 0.0000734727 |
| Quercus lobata | 12 | 6 | CH_qlo_371 | 4 | 4 | 0.000000000000412889 |
| Rhododendron simsii | chr03 | 6 | CH_rsi_191 | 5 | 10 | 0.00000000000183465 |
| Sechium edule | LG04 | 6 | CH_sed_333 | 2 | 2 | 0.0000713419 |
| Solanum lycopersicum | SL4.0ch08 | 6 | CH_sly_234 | 3 | 3 | 0.00000000516764 |
| Schrenkiella parvula | ch7-4 | 6 | CH_spa_22 | 5 | 5 | 0.0000000000000161436 |
| Solanum pennellii | Spenn-ch08 | 6 | CH_spe_573 | 2 | 2 | 0.000044479 |
| Solanum tuberosum | ST4.03ch08 | 6 | CH_stu_255 | 3 | 3 | 0.00000000393922 |
| Trochodendron aralioides | group15 | 6 | CH_tar_548 | 2 | 2 | 0.0000600366 |
| Theobroma cacao | Chromosome_3 | 6 | CH_tca_309 | 3 | 4 | 0.00000012873 |
| Vitis vinifera | chr2 | 6 | CH_vvi_630 | 2 | 2 | 0.000228189 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |