Functional clusters

Information

  • Type InterPro
  • Description Tetratricopeptide repeat protein SRFR1-like

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_3 5 CH_amhyb_253 2 2 0.0000841751
Amborella trichopoda AmTr_v1.0_scaffold00144 5 CH_atr_596 2 2 0.000476644
Amborella trichopoda AmTr_v1.0_scaffold00001 5 CH_atr_597 2 2 0.000476644
Brassica carinata Contig1001 5 CH_bca_344 3 3 0.00000000274174
Capsicum annuum PGAv.1.6.scaffold1075 5 CH_can_593 2 2 0.0000826105
Chara braunii BFEA01000419 5 CH_cbr_88 3 7 0.000000271579
Carya illinoinensis Chr01 5 CH_cil_597 2 2 0.0000619828
Carica papaya supercontig_6 5 CH_cpa_409 2 2 0.0000950661
Glycine max Gm11 5 CH_gma_838 2 2 0.000379557
Lupinus albus Lalb_Chr16 5 CH_lal_550 2 2 0.000157447
Malus domestica Chr15 5 CH_mdo_1016 2 2 0.000113763
Phaseolus vulgaris Chr02 5 CH_pvu_552 2 3 0.000220418
Amaranthus hybridus AmaHy_arrow1_Scaffold_3 6 CH_amhyb_253 2 2 0.0000841751
Amborella trichopoda AmTr_v1.0_scaffold00144 6 CH_atr_596 2 2 0.000476644
Amborella trichopoda AmTr_v1.0_scaffold00001 6 CH_atr_597 2 2 0.000476644
Brassica carinata Contig1001 6 CH_bca_344 3 3 0.00000000274174
Capsicum annuum PGAv.1.6.scaffold1075 6 CH_can_593 2 2 0.0000826105
Chara braunii BFEA01000419 6 CH_cbr_88 3 7 0.000000271579
Carya illinoinensis Chr01 6 CH_cil_597 2 2 0.0000619828
Carica papaya supercontig_6 6 CH_cpa_409 2 2 0.0000950661
Glycine max Gm11 6 CH_gma_838 2 2 0.000379557
Lupinus albus Lalb_Chr16 6 CH_lal_550 2 2 0.000157447
Malus domestica Chr15 6 CH_mdo_1016 2 2 0.000113763
Phaseolus vulgaris Chr02 6 CH_pvu_552 2 3 0.000220418

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001