Functional clusters

Information

  • Type InterPro
  • Description ERAD-associated E3 ubiquitin-protein ligase component HRD3

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr9 5 CH_acertr_366 3 11 0.00000122973
Brassica oleracea C2 5 CH_bol_859 2 2 0.000686409
Chara braunii BFEA01000526 5 CH_cbr_205 2 2 0.0000719269
Manihot esculenta Chromosome06 5 CH_mes_562 2 3 0.000183184
Pisum sativum chr4LG4 5 CH_psa_525 2 3 0.000156486
Quercus lobata 10 5 CH_qlo_951 3 13 0.00000114325
Trochodendron aralioides group0 5 CH_tar_716 2 2 0.00018011
Vaccinium macrocarpon chr3_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_504 2 2 0.0000929238
Vanilla planifolia CM028154.1 5 CH_vpl_275 3 19 0.00000793089
Acer truncatum chr9 6 CH_acertr_366 3 11 0.00000122973
Brassica oleracea C2 6 CH_bol_859 2 2 0.000686409
Chara braunii BFEA01000526 6 CH_cbr_205 2 2 0.0000719269
Manihot esculenta Chromosome06 6 CH_mes_562 2 3 0.000183184
Pisum sativum chr4LG4 6 CH_psa_525 2 3 0.000156486
Quercus lobata 10 6 CH_qlo_951 3 13 0.00000114325
Trochodendron aralioides group0 6 CH_tar_716 2 2 0.00018011
Vaccinium macrocarpon chr3_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_504 2 2 0.0000929238
Vanilla planifolia CM028154.1 6 CH_vpl_275 3 19 0.00000793089

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001